Parental gene:

aca-mir-5408a, ENSACAG00000001053

Aliases:None
Description:aca-mir-5408a [Source:miRBase;Acc:MI0018911]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343282.1:1463448..1472949(+)


>ENSACAG00000001053
ATGATGTCGGCCTTGTGTTTCGCTCGGATCGGGGCGGGAAGCGCTTCCTTGAGTTCTCAGTTAATCTGGAACATTCAGCA
CCGAGCAAATCACTGGCAGTCTTCACTTCTCGGACTGAGGGCTGCTCTCCCCATGAGAGCAGAACCCAAGAAAAAAAAGA
AGGTGGATCCAAAGAGAGAAATTGCCATACGGGACCGTATGAAGAAGAAGATTAAAAAATTGGAAAAGGCTCCCCAGGAA
TTGATTCCCATTGAAGACTTTATAACACCGTTCCGATTCATGGATGAAACAAGGGTGCGAGACATCTCTCCCCTGTCCTT
TGAGGAAAGCGAAAGACGAGCACTGCTTTTGAAGAAGTGGACAGTGTACAAGCAAGCACAGAACAAGGCAGAGATGAAGG
CAGCCAAGGCCCTGATGGAGGCCCAAGAAGAGGCCTTAAAAGAACTACGCCTCGAATCGGAGGAGCTGTATCAGGCAGCT
ATTCAGCGGGATGAAGGGCTGTTTCCTTTTGAGAGGCAGGAGCCGACCCACACACCGCCGGTGTCAAAGTATGAGGCTCC
CGAAGGGAGGTGCCATGACATCACTAAAGTTTATACCCATTGA

Library Parental gene expression (RPM)
SRP009831_adrenal 27 .18 RPM
SRP009831_brain 32 .14 RPM
SRP009831_dewlap 59 .65 RPM
SRP009831_embryo 42 .20 RPM
SRP009831_heart 33 .00 RPM
SRP009831_liver 29 .29 RPM
SRP009831_lung 16 .42 RPM
SRP009831_ovary 50 .65 RPM
SRP009831_skeletal_muscle 26 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011421 ortholog_one2one 1 retrogene
retro_amel_257,
Callithrix jacchus ENSCJAG00000001584 ortholog_one2one 1 retrogene
retro_cjac_3220,
Equus caballus ENSECAG00000009876 ortholog_one2one 1 retrogene
retro_ecab_687,
Homo sapiens ENSG00000185608 ortholog_one2one 1 retrogene
retro_hsap_1020,
Gorilla gorilla ENSGGOG00000012336 ortholog_one2one 1 retrogene
retro_ggor_807,
Myotis lucifugus ENSMLUG00000002456 ortholog_one2many 1 retrogene
retro_mluc_1950,
Macaca mulatta ENSMMUG00000016081 ortholog_one2many 1 retrogene
retro_mmul_57,
Mustela putorius furo ENSMPUG00000003865 ortholog_one2one 1 retrogene
retro_mputfur_394,
Nomascus leucogenys ENSNLEG00000005372 ortholog_one2one 1 retrogene
retro_nleu_899,
Pongo abelii ENSPPYG00000011578 ortholog_one2one 1 retrogene
retro_pabe_857,
Rattus norvegicus ENSRNOG00000049686 ortholog_one2one 1 retrogene
retro_rnor_1624,
Tarsius syrichta ENSTSYG00000014747 ortholog_one2one 1 retrogene
retro_tsyr_1589,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_149 85.86 99.00
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Download FASTA sequences of all ENSACAG00000001053 retrocopies