Parental gene:

TUBG1, ENSPPYG00000008384

Aliases:None
Description:tubulin gamma-1 chain [Source:RefSeq peptide;Acc:NP_001125599]
Organism:Orangutan (Pongo abelii)
Coordinates:17:46770578..46831233(-)


>ENSPPYG00000008384
ATGCCGAGGGAAATCATCACCCTACAGTTGGGCCAGTGCGGCAATCAGATTGGGTTCGAGTTCTGGAAACAGCTGTGCGC
CGAGCATGGTATCAGCCCCGAGGGCATTGTGGAGGAGTTCGCCACCGAGGGCACTGACCGCAAGGACGTCTTTTTCTACC
AGGCAGACGATGAGCACTACATCCCCCGGGCGGTGCTGCTGGACCTGGAACCCCGGGTGATCCACTCCATCCTCAACTCC
CCCTATGCCAAGCTCTACAATCCAGAGAACATCTACCTGTCGGAACATGGAGGAGGAGCTGGCAACAACTGGGCCAGCGG
ATTCTCCCAGGGTGAGAAAATTCATGAAGACATCTTTGACATCATAGACCGAGAAGCAGATGGAAGTGACAGTTTAGAGG
GCTTCGTGCTGTGTCACTCCATCGCTGGGGGTACGGGTTCTGGCCTGGGCTCCTACCTCCTGGAGCGACTGAATGACAGG
TACCCCAAGAAGCTAGTGCAGACTTACTCAGTGTTTCCCTACCAGGACGAGATGAGCGACGTGGTGGTTCAGCCCTACAA
TTCACTCCTGACACTCAAGAGACTGACGCAGAACGCAGACTGTGTGGTGGTGCTGGACAACACAGCCCTGAACCGGATTG
CCACAGACCGCCTGCACATCCAGAACCCGTCCTTCTCCCAGATCAACCAGCTGGTGTCCACCATCATGTCGGCCAGCACC
ACCACCCTGCGCTACCCTGGCTACATGAACAATGACCTCATCGGCCTCATCGCCTCGCTCATTCCCACCCCACGGCTCCA
CTTCCTCATGACCGGCTACACCCCGCTCACTACGGACCAGTCAGTGGCCAGTGTGAGGAAGACCACGGTCCTGGATGTCA
TGAGGCGGCTGCTGCAGCCCAAGAACGTGATGGTGTCCACAGGCCGAGACCGCCAGACCAACCACTGCTACATCGCCATC
CTCAACATCATCCAGGGAGAGGTGGACCCCACCCAGGTCCACAAGAGCCTGCAGAGGATCCGGGAACGGAAGTTGGCCAA
CTTCATCCCGTGGGGCCCCGCCAGCATCCAGGTGGCCCTGTCGAGGAAGTCTCCCTACCTGCCCTCGGCCCACCGGGTCA
GCGGGCTCATGATGGCCAACCACACCAGCATCTCCTCGCTCTTTGAAAGTTCCTGCCAGCAGTTTGACAAGCTGCGGAAG
CGGGATGCCTTCCTCGAGCAATTCCGTAAGGAGGACATGTTCAAGGACAACTTTGATGAGATGGACAGGTCTAGGGAGGT
TGTTCAGGAGCTCATTGATGAGTACCATGCGGCCACCGAGCCAGACTACATTTCCTGGGGCACCCAGGAGCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 73 .70 RPM
SRP007412_cerebellum 41 .10 RPM
SRP007412_heart 5 .39 RPM
SRP007412_kidney 15 .55 RPM
SRP007412_liver 4 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004907 possible_ortholog 1 retrogene
retro_cjac_4142,
Echinops telfairi ENSETEG00000008542 ortholog_one2one 1 retrogene
retro_etel_496,
Homo sapiens ENSG00000131462 possible_ortholog 1 retrogene
retro_hsap_3725,
Gorilla gorilla ENSGGOG00000010899 ortholog_one2one 1 retrogene
retro_ggor_2515,
Nomascus leucogenys ENSNLEG00000011686 possible_ortholog 1 retrogene
retro_nleu_71,
Pan troglodytes ENSPTRG00000009211 possible_ortholog 1 retrogene
retro_ptro_2520,
Rattus norvegicus ENSRNOG00000020213 possible_ortholog 2 retrogenes
retro_rnor_2070, retro_rnor_2072,
Tupaia belangeri ENSTBEG00000015835 possible_ortholog 3 retrogenes
retro_tbel_188, retro_tbel_3516, retro_tbel_955,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3132 83.08 73.17
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Download FASTA sequences of all ENSPPYG00000008384 retrocopies