Parental gene:

C12orf45, ENSPPYG00000004897

Aliases:None
Description:chromosome 12 open reading frame 45 [Source:HGNC Symbol;Acc:28628]
Organism:Orangutan (Pongo abelii)
Coordinates:12:106739880..106748410(+)


>ENSPPYG00000004897
ATGGAGGTTCATGGCAAGCTCCAGGCTAGCCCGAGTTGTTCGTCGCCCACCCGGGATTCCTCAGGAGTCCCAGTGTCCAA
GGAGCTGCTGACGGCGGGAAGCGACGGCCGCGGAGGTATATGGGACAGGCTGCTCATCAACTCCCAACCTAAGTCCAGAA
AGACCTCCACTCTTCAAACAGTTCGGATAGAGAGGAGTCCCTTATTGGACCAGGTACAGACCTTTCTCCCACAGATGGCA
CGGGCAAATGAAAAGCTAAGAAAAGAAATGGCAGCTGCACCACCTGGTCGTTTCAATATTGAAAACATTGATGGGCCTCA
TGGTAAAGTTATACAAATGGATGTGGCTTTGTTTGAGATGAATCAGTCGGATTCAAAAGAAGCGGACAGTTCAGAAGAGA
GTTCACAAGACAGTTCAGAGAACAGTTCAGAATCAGAGGACGAAGATGAGAGCATCCCATCTGAAGTCACCATAGATAAC
ATTAAGCTTCCCAATTCTGAAGGTGGAAAAGGCAAGATTGAAGTTTTGGACAGTCCAGCAAGTAAAAAAAAGAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .59 RPM
SRP007412_cerebellum 3 .53 RPM
SRP007412_heart 1 .63 RPM
SRP007412_kidney 3 .94 RPM
SRP007412_liver 6 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000014728 ortholog_one2many 1 retrogene
retro_cjac_333,
Dasypus novemcinctus ENSDNOG00000017235 ortholog_one2one 1 retrogene
retro_dnov_2327,
Homo sapiens ENSG00000151131 ortholog_one2one 1 retrogene
retro_hsap_292,
Gallus gallus ENSGALG00000012694 ortholog_one2one 1 retrogene
retro_ggal_15,
Gorilla gorilla ENSGGOG00000027272 ortholog_one2one 1 retrogene
retro_ggor_331,
Macaca mulatta ENSMMUG00000017133 ortholog_one2one 1 retrogene
retro_mmul_551,
Nomascus leucogenys ENSNLEG00000006584 ortholog_one2one 1 retrogene
retro_nleu_2414,
Pan troglodytes ENSPTRG00000005381 ortholog_one2one 1 retrogene
retro_ptro_240,
Sus scrofa ENSSSCG00000027792 ortholog_one2one 2 retrogenes
retro_sscr_105, retro_sscr_153,
Tursiops truncatus ENSTTRG00000005714 ortholog_one2many 1 retrogene
retro_ttru_1381,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_382 68.00 67.03
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Download FASTA sequences of all ENSPPYG00000004897 retrocopies