Parental gene:

ENSCJAG00000014728

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:9:95016000..95027358(+)


>ENSCJAG00000014728
ATGGAGGTTCATGGAAATCCCCAGGCTAGCCCGAGTTGTTCGTCTCCCAGCCGGGACTGCTCGGGGGTCCCAGTGTCCAG
GGAGCTGCTGACTACGGGAAGCGACGGTCGCGGAGGTCTATGGGACAGGTTGCTCATCAATCCCCAACCTAAGTCCAGAA
AGACTTCCACTCTTCAAACAGTTCGGATAGAAAGGAGTCCCTTGTTGGATCAGGTACAGACCTTTCTCCCACAGATGGCA
CAGGCAAATGAAAAGCTAAGAAAAGAAATGGCAGCTGCACCACCTGGTCGTTTCAACATTGAAAACATTGATGGGACTCA
TGGCAAAGTTATACAAATGGATGTGGCTCTGTTTGAGATGAATCGGTCGGATTCAAAAGAAGCGGACAGTTCAGAGGAAA
GTTCACAAGACAGTTCAGAGAACAGTTCAGAATCAGAGGATGAAGATGACAGCATCCCATCTGAAGTCACCATAGATAAC
ATTAAGCTTCCCAATTCTGAAGGTGGAAAAGGCAAGATTGAAGTTTTGGACAGTCCAGCAAGTAAAAAAGAAATAGCCAA
ATAA

Library Parental gene expression (RPM)
SRP051959_spleen 8 .15 RPM
SRP051959_skeletal_muscle 3 .54 RPM
SRP051959_lymph_node 10 .25 RPM
SRP051959_lung 5 .43 RPM
SRP051959_liver 5 .05 RPM
SRP051959_kidney 6 .26 RPM
SRP051959_heart 4 .47 RPM
SRP051959_colon 3 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000017235 ortholog_one2many 1 retrogene
retro_dnov_2327,
Homo sapiens ENSG00000151131 ortholog_one2many 1 retrogene
retro_hsap_292,
Gallus gallus ENSGALG00000012694 ortholog_one2many 1 retrogene
retro_ggal_15,
Gorilla gorilla ENSGGOG00000027272 ortholog_one2many 1 retrogene
retro_ggor_331,
Macaca mulatta ENSMMUG00000017133 ortholog_one2many 1 retrogene
retro_mmul_551,
Nomascus leucogenys ENSNLEG00000006584 ortholog_one2many 1 retrogene
retro_nleu_2414,
Pongo abelii ENSPPYG00000004897 ortholog_one2many 1 retrogene
retro_pabe_382,
Pan troglodytes ENSPTRG00000005381 ortholog_one2many 1 retrogene
retro_ptro_240,
Sus scrofa ENSSSCG00000027792 ortholog_one2many 2 retrogenes
retro_sscr_105, retro_sscr_153,
Tursiops truncatus ENSTTRG00000005714 ortholog_many2many 1 retrogene
retro_ttru_1381,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_333 88.51 94.05
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Download FASTA sequences of all ENSCJAG00000014728 retrocopies