Parental gene:

FAR1, ENSPPYG00000003470

Aliases:FAR1, MLSTD2
Description:Fatty acyl-CoA reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q5R834]
Organism:Orangutan (Pongo abelii)
Coordinates:11:56401927..56466265(-)


>ENSPPYG00000003470
ATGGTTTCAATCCCAGAATACTATGAAGGCAAGAATGTCCTCCTCACAGGAGCTACCGGTTTTCTAGGGAAGGTGCTTCT
GGAAAAGTTGCTGAGGTCTTGTCCTAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGACAGACACCACAAG
AGCGAGTGGAAGAAGTCCTTAGTGGCAAGCTCTTTGACAGATTGAGAGATGAAAATCCAGATTTTAGAGAGAAAATTATA
GCAATCAACAGCGAACTCACCCAACCTAAACTGGCTCTCAGTGAAGAAGATAAAGAGGTGATCATAGAGTCTACCAATAT
TATATTCCACTGTGCAGCTACAGTAAGGTTTAATGAAAATTTAAGAGATGCTGTTCAGTTAAATGTGATTGCAACGCGAC
AGCTTATTCTCCTTGCACAACAAATGAAGAATCTGGAAGTGTTCATGCATGTATCAACAGCATATGCCTACTGTAATCGA
AAGCATATTGATGAAGTAGTCTATCCACCACCTGTGGATCCCAAGAAGCTGATTGATTCTTTAGAGTGGATGGATGATGG
CCTAGTAAATGATATCACGCCAAAATTGATAGGAGACAGACCTAATACATACATATACACAAAAGCATTGGCAGAATATG
TTGTACAACAAGAAGGAGCAAAACTAAATGTGGCAATTGTAAGGCCATCGATTGTTGGTGCCAGTTGGAAAGAACCTTTT
CCGGGATGGATTGATAACTTTAATGGACCAAGTGGTCTCTTTATTGCGGCAGGGAAAGGAATTCTTCGAACAATACGTGC
CTCCAACAATGCCCTTGCAGATCTTGTTCCTGTAGATGTAGTTGTCAACATGAGTCTTGCGGCAGCCTGGTATTCCGGAG
TTAATAGACCAAGAAACATCATGGTGTATAATTGTACAACAGGCAGCACTAATCCTTTCCACTGGGGTGAAGTTGAGTAC
CATGTAATTTCCACTTTCAAGAGGAATCCTCTCGAACAGGCCTTCAGACGGCCCAATGTAAATCTAACCTCCAATCATCT
TTTATATCATTACTGGATTGCTGTAAGCCATAAGGCCCCAGCATTCCTGTATGATATCTACCTCAGGATGACTGGAAGAA
GCCCAAGGATGATGAAAACAATAACTCGTCTTCACAAAGCTATGGTGTTTCTTGAATATTTCACAAGTAATTCTTGGGTT
TGGAATACTGACAATGTCAATATGTTAATGAATCAACTAAACCCTGAAGATAAAAAGACCTTCAATATTGATGTACGGCA
GTTACATTGGGCAGAATATATAGAGAACTACTGCTTGGGAACTAAGAAGTACGTATTGAACGAAGAAATGTCTGGCCTCC
CTGCAGCCAGAAAACATCTGAACAAGTTGCGGAATATACGTTATGGTTTTAATACTATCCTTGTGATCCTCATCTGGCGC
ATTTTTATTGCAAGATCACAAATGGCAAGAAATATCTGGTACTTTGTGGTTAGTCTGTGTTACAAGTTTCTGTCATACTT
CCGAGCATCCAGCACTATGAGATACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .47 RPM
SRP007412_cerebellum 94 .36 RPM
SRP007412_heart 23 .96 RPM
SRP007412_kidney 24 .40 RPM
SRP007412_liver 7 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003490 ortholog_one2one 2 retrogenes
retro_chof_1358, retro_chof_1733,
Callithrix jacchus ENSCJAG00000010077 ortholog_one2many 1 retrogene
retro_cjac_545,
Cavia porcellus ENSCPOG00000002654 ortholog_one2one 1 retrogene
retro_cpor_267,
Homo sapiens ENSG00000197601 ortholog_one2one 1 retrogene
retro_hsap_1225,
Gorilla gorilla ENSGGOG00000001180 ortholog_one2one 1 retrogene
retro_ggor_958,
Macaca mulatta ENSMMUG00000011990 ortholog_one2one 1 retrogene
retro_mmul_1301,
Nomascus leucogenys ENSNLEG00000017695 ortholog_one2one 1 retrogene
retro_nleu_698,
Oryctolagus cuniculus ENSOCUG00000004336 ortholog_one2one 2 retrogenes
retro_ocun_1056, retro_ocun_790,
Otolemur garnettii ENSOGAG00000005064 ortholog_one2one 2 retrogenes
retro_ogar_1353, retro_ogar_341,
Pan troglodytes ENSPTRG00000024190 ortholog_one2one 1 retrogene
retro_ptro_840,
Rattus norvegicus ENSRNOG00000013176 ortholog_one2one 1 retrogene
retro_rnor_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1019 82.31 53.59
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Download FASTA sequences of all ENSPPYG00000003470 retrocopies