Parental gene:

FAR1, ENSMMUG00000011990

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:14:58153018..58217956(-)


>ENSMMUG00000011990
ATGGTTTCAATCCCAGAATACTATGAAGGCAAGAATGTCCTCCTCACGGGAGCTACCGGTTTTCTAGGGAAGGTGCTTCT
GGAAAAGTTGCTGAGGTCTTGTCCTAAGGTGAATTCAGTATATGTTTTGGTGAGGCAGAAAGCTGGACAGACACCACAAG
AGCGAGTGGAAGAAGTCCTTAGTGGCAAGCTCTTTGACAGATTGAGAGATGAAAATCCAGATTTTAGAGAGAAAATTATA
GCAATCAACAGCGAACTCACCCAACCTAAACTGGCTCTTAGTGAAGAAGATAAAGAGGTGATCATAGATTCTACAAATAT
TATATTCCACTGTGCAGCTACAGTAAGGTTTAATGAAAATTTAAGAGATGCTGTTCAGTTAAATGTGATTGCAACGCGAC
AGCTTATTCTCCTTGCACAACAAATGAAGAATCTGGAAGTGTTCATGCATGTATCAACAGCATATGCCTACTGTAATCGA
AAGCATATTGATGAAGTCGTCTATCCACCACCTGTGGATCCCAAGAAGCTGATTGATTCTTTAGAGTGGATGGATGATGG
CCTAGTAAATGATATCACGCCAAAATTGATAGGAGACAGACCTAATACATACATATACACAAAAGCATTGGCAGAATATG
TTGTACAACAAGAAGGAGCAAAACTAAATGTGGCAATTGTAAGGCCATCGATTGTTGGTGCCAGTTGGAAAGAACCTTTT
CCAGGATGGATTGATAACTTTAATGGACCAAGTGGTCTCTTTATTGCGGCAGGGAAAGGAATTCTTCGAACAATACGTGC
CTCCAACAATGCCCTTGCAGATCTTGTTCCTGTAGATGTAGTTGTCAACATGAGTCTTGCGGCAGCCTGGTATTCCGGAG
TTAATAGACCAAGAAACATCATGGTGTATAATTGTACAACAGGCAGCACTAATCCCTTCCACTGGGGCGAAGTTGAGTAC
CATGTAATTTCCACTTTCAAGAGGAATCCTCTCGAACAGGCCTTCAGACGGCCCAATGTAAATCTAACCTCCAATCATCT
TTTATATCATTACTGGATTGCTGTAAGCCATAAGGCCCCAGCATTCCTGTATGATATCTACCTCAGGATGACTGGAAGAA
GCCCAAGGATGATGAAAACAATAACTCGTCTTCACAAAGCTATGGTGTTTCTTGAATATTTCACAAGTAATTCTTGGGTT
TGGAATACTGACAATGTCAATATGTTAATGAATCAACTAAACCCTGAAGATAAAAAGGCAAGCAAAACCTTCAATATTGA
TGTACGGCAGTTACATTGGGCAGAATATATAGAGAACTACTGCTTGGGAACTAAGAAGTACGTATTGAATGAAGAAATGT
CTGGCCTCCCTGCAGCCAGAAAACATCTGAACAAGTTGCGGAATATACGTTATGGTTTTAATACTATCCTTGTGATCCTC
ATCTGGCGCATTTTTATTGCAAGATCACAAATGGCAAGAAACATCTGGTACTTTGTGGTTAGTCTGTGTACAAAGTTTCT
GTCATACTTCCGAGCATCCAGCACTATGAGATACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 30 .86 RPM
SRP007412_brain 62 .97 RPM
SRP007412_cerebellum 74 .58 RPM
SRP007412_heart 28 .38 RPM
SRP007412_kidney 28 .76 RPM
SRP007412_liver 3 .17 RPM
SRP007412_testis 37 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003490 ortholog_one2one 2 retrogenes
retro_chof_1358, retro_chof_1733,
Callithrix jacchus ENSCJAG00000010077 ortholog_one2many 1 retrogene
retro_cjac_545,
Cavia porcellus ENSCPOG00000002654 ortholog_one2one 1 retrogene
retro_cpor_267,
Homo sapiens ENSG00000197601 ortholog_one2one 1 retrogene
retro_hsap_1225,
Gorilla gorilla ENSGGOG00000001180 ortholog_one2one 1 retrogene
retro_ggor_958,
Nomascus leucogenys ENSNLEG00000017695 ortholog_one2one 1 retrogene
retro_nleu_698,
Oryctolagus cuniculus ENSOCUG00000004336 ortholog_one2one 2 retrogenes
retro_ocun_1056, retro_ocun_790,
Otolemur garnettii ENSOGAG00000005064 ortholog_one2one 2 retrogenes
retro_ogar_1353, retro_ogar_341,
Pongo abelii ENSPPYG00000003470 ortholog_one2one 1 retrogene
retro_pabe_1019,
Pan troglodytes ENSPTRG00000024190 ortholog_one2one 1 retrogene
retro_ptro_840,
Rattus norvegicus ENSRNOG00000013176 ortholog_one2one 1 retrogene
retro_rnor_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1301 85.07 55.21
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Download FASTA sequences of all ENSMMUG00000011990 retrocopies