Parental gene: | OAT, ENSPPYG00000002737 |
| Aliases: | None |
| Description: | ornithine aminotransferase, mitochondrial [Source:RefSeq peptide;Acc:NP_001125904] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:123953992..123977245(-) |
>ENSPPYG00000002737
ATGTTTTCCAAACTAGCACATTTGCAGAGGTTTGCTGTACTTAGTCGCGGAGTTCATTCTTCAGTGGCTTCTGCTACATC
TGTCGCAACTAAAAAAACAGTCCAAGGCCCTCCAACCTCTGATGACATTTTTGAAAGAGAATATAAGTATGGTGCACACA
ACTACCATCCTTTACCTGTAGCCCTGGAGAGAGGAAAAGGTATTTACTTATGGGATGTAGAAGGCAGAAAATATTTTGAC
TTCCTGAGTTCTTACAGTGCTGTCAACCAAGGGCATTGTCACCCCAAGATTGTGAATGCTCTGAAGAGTCAAGTGGACAA
ATTGACCTTAACATCTAGAGCTTTCTATAATAACGTACTTGGTGAATATGAGGAGTATATTACTAAACTTTTCAACTACC
ACAAAGTTCTTCCTATGAATACAGGAGTGGAGGCTGGAGAGACTGCCTGTAAACTAGCTCGTAAGTGGGGCTATACTGTG
AAGGGCATTCAGAAATACAAAGCAAAGATTATTTTTGCAGCTGGAAACTTCTGGGGTAGGACGTTGTCTGCTATCTCCAG
TTCCACAGACCCAACCAGTTATGATGGTTTTGGACCATTTATGCCAGGATTCGACATCATTCCCTATAATGATCTGCCTG
CACTGGAGCGTGCTCTTCAGGATCCAAATGTGGCTGCGTTCATGGTAGAACCAATTCAGGGTGAAGCAGGCGTTGTTGTT
CCGGATCCAGGCTACCTAATGGGAGTGCGAGAGCTCTGCACCAGGCACCAGGTTCTGTTTATTGCTGATGAAATACAGAC
AGGATTGGCCAGAACTGGTAGATGGCTGGCTGTTGATTATGAAAATGTCAGACCTGATATAGTCCTCCTTGGAAAGGCCC
TTTCTGGGGGCTTATACCCTGTGTCTGCAGTGCTGTGTGATGATGACATAATGCTGACCATTAAGCCAGGGGAGCATGGG
TCCACATATGGTGGCAATCCACTAGGCTGCCGAGTGGCCATCGCAGCCCTTGAGGTTTTAGAAGAAGAAAACCTTGCTGA
AAATGCAGACAAATTGGGCCTTATCTTGAGAAATGAACTCATGAAGCTACCTTCTGATGTTGTAACTGCCATAAGAGGAA
AAGGATTATTAAACGCTATTGTCATTAAAGAAACCAAAGATTGTGATGCTTGGAAGGTGTGTCTACGACTTCGAGATAAT
GGACTTCTGGCCAAGCCAACCCATGGCGACATTATCAGGTTGTCGCCTCCGCTGGTGATCAAGGAGGATGAGCTTCGAGA
GTCCATTGAAATTATTAACAAGACCATCTTGTCTTTCTGA
ATGTTTTCCAAACTAGCACATTTGCAGAGGTTTGCTGTACTTAGTCGCGGAGTTCATTCTTCAGTGGCTTCTGCTACATC
TGTCGCAACTAAAAAAACAGTCCAAGGCCCTCCAACCTCTGATGACATTTTTGAAAGAGAATATAAGTATGGTGCACACA
ACTACCATCCTTTACCTGTAGCCCTGGAGAGAGGAAAAGGTATTTACTTATGGGATGTAGAAGGCAGAAAATATTTTGAC
TTCCTGAGTTCTTACAGTGCTGTCAACCAAGGGCATTGTCACCCCAAGATTGTGAATGCTCTGAAGAGTCAAGTGGACAA
ATTGACCTTAACATCTAGAGCTTTCTATAATAACGTACTTGGTGAATATGAGGAGTATATTACTAAACTTTTCAACTACC
ACAAAGTTCTTCCTATGAATACAGGAGTGGAGGCTGGAGAGACTGCCTGTAAACTAGCTCGTAAGTGGGGCTATACTGTG
AAGGGCATTCAGAAATACAAAGCAAAGATTATTTTTGCAGCTGGAAACTTCTGGGGTAGGACGTTGTCTGCTATCTCCAG
TTCCACAGACCCAACCAGTTATGATGGTTTTGGACCATTTATGCCAGGATTCGACATCATTCCCTATAATGATCTGCCTG
CACTGGAGCGTGCTCTTCAGGATCCAAATGTGGCTGCGTTCATGGTAGAACCAATTCAGGGTGAAGCAGGCGTTGTTGTT
CCGGATCCAGGCTACCTAATGGGAGTGCGAGAGCTCTGCACCAGGCACCAGGTTCTGTTTATTGCTGATGAAATACAGAC
AGGATTGGCCAGAACTGGTAGATGGCTGGCTGTTGATTATGAAAATGTCAGACCTGATATAGTCCTCCTTGGAAAGGCCC
TTTCTGGGGGCTTATACCCTGTGTCTGCAGTGCTGTGTGATGATGACATAATGCTGACCATTAAGCCAGGGGAGCATGGG
TCCACATATGGTGGCAATCCACTAGGCTGCCGAGTGGCCATCGCAGCCCTTGAGGTTTTAGAAGAAGAAAACCTTGCTGA
AAATGCAGACAAATTGGGCCTTATCTTGAGAAATGAACTCATGAAGCTACCTTCTGATGTTGTAACTGCCATAAGAGGAA
AAGGATTATTAAACGCTATTGTCATTAAAGAAACCAAAGATTGTGATGCTTGGAAGGTGTGTCTACGACTTCGAGATAAT
GGACTTCTGGCCAAGCCAACCCATGGCGACATTATCAGGTTGTCGCCTCCGCTGGTGATCAAGGAGGATGAGCTTCGAGA
GTCCATTGAAATTATTAACAAGACCATCTTGTCTTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 94 .99 RPM |
| SRP007412_cerebellum | 72 .35 RPM |
| SRP007412_heart | 14 .57 RPM |
| SRP007412_kidney | 51 .18 RPM |
| SRP007412_liver | 322 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012633 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000065154 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000848 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000005655 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000030934 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000482 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000003028 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000010734 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004225 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2989 | 78.76 | 51.03 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3754 | 91.03 | 53.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002737 retrocopies