Parental gene:

Oat, ENSMUSG00000030934

Aliases:Oat, AI194874
Description:ornithine aminotransferase [Source:MGI Symbol;Acc:MGI:97394]
Organism:Mouse (Mus musculus)
Coordinates:7:132557474..132576398(-)


>ENSMUSG00000030934
ATGCTTTCTAAACTAGCAAGTCTGCAGACCATTGCTGCTCTGCGCCGAGGAGTCCACACCTCAGTCGCCTCTGCCACGTC
TGTTGCCACAAAGAAGACAGAGCAAGGCCCACCATCCTCCGAGTACATTTTTGAACGGGAATCTAAATATGGTGCACACA
ATTACCATCCTTTGCCTGTAGCCCTGGAGAGAGGAAAAGGCATTTATATGTGGGATGTGGAAGGCAGGCAGTACTTCGAT
TTCCTGAGTGCTTATGGTGCTGTCAGCCAAGGACACTGCCACCCAAAGATCATAGATGCCATGAAGAGTCAGGTGGACAA
GCTGACATTAACATCTCGGGCTTTCTATAACAATGTCCTTGGTGAATACGAGGAGTACATCACCAAGCTTTTCAACTACA
ACAAAGTTCTCCCTATGAATACAGGAGTGGAGGCTGGAGAGACTGCATGTAAGCTCGCTCGTCGTTGGGGCTACACCGTG
AAAGGCATCCAGAAATACAAAGCAAAGATTGTTTTTGCTGATGGGAACTTTTGGGGTCGAACACTATCTGCAATCTCCAG
TTCCACAGATCCGACCAGTTATGATGGCTTTGGACCCTTCATGCCAGGCTTTGAAACCATCCCATATAACGATCTGCCCG
CACTGGAGCGTGCTCTTCAGGATCCAAATGTTGCTGCCTTCATGGTGGAGCCCATCCAGGGTGAAGCAGGCGTTATCGTT
CCGGATCCAGGATACCTGACAGGAGTTCGGGAACTCTGCACCAGGCACCAGGTCCTGTTTATTGCTGATGAAATACAGAC
AGGATTGGCCAGAACTGGTAGATGGCTGGCTGTGGATCATGAGAATGTCAGACCTGATATGGTTCTTCTTGGGAAGGCCC
TTTCTGGCGGTTTATACCCTGTGTCTGCAGTGCTGTGTGACGATGAGATAATGCTGACCATTAAACCAGGCGAGCACGGC
TCCACATACGGCGGAAACCCACTAGGCTGCCGAATTGCCATTGCGGCTCTTGAGGTTTTAGAAGAGGAGAATCTTGCTGA
GAATGCAGACAAGATGGGCGCTATCCTGAGGAAGGAGCTCATGAAGCTGCCCTCTGACGTTGTGACCTCAGTGAGAGGGA
AAGGGTTGCTAAATGCCATTGTCATCAGAGAAACCAAAGACTGTGATGCTTGGAAGGTGTGCCTGCGACTTCGAGATAAC
GGGCTTCTGGCCAAGCCAACCCACGGTGATATCATCAGGCTTGCCCCTCCCCTTGTGATCAAGGAGGATGAGATCCGGGA
GTCCGTGGAGATCATCAACAAGACTATCTTGTCCTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain 67 .03 RPM
SRP007412_cerebellum 62 .35 RPM
SRP007412_heart 146 .03 RPM
SRP007412_kidney 213 .19 RPM
SRP007412_liver 678 .15 RPM
SRP007412_testis 25 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012633 ortholog_one2one 1 retrogene
retro_cjac_2462,
Homo sapiens ENSG00000065154 ortholog_one2one 1 retrogene
retro_hsap_4828,
Gorilla gorilla ENSGGOG00000000848 ortholog_one2one 1 retrogene
retro_ggor_3010,
Macropus eugenii ENSMEUG00000005655 ortholog_one2one 1 retrogene
retro_meug_613,
Nomascus leucogenys ENSNLEG00000000482 ortholog_one2one 2 retrogenes
retro_nleu_2176, retro_nleu_503,
Pongo abelii ENSPPYG00000002737 ortholog_one2one 2 retrogenes
retro_pabe_2989, retro_pabe_3754,
Pan troglodytes ENSPTRG00000003028 ortholog_one2one 1 retrogene
retro_ptro_3213,
Sus scrofa ENSSSCG00000010734 ortholog_one2one 1 retrogene
retro_sscr_1181,
Tursiops truncatus ENSTTRG00000004225 ortholog_one2one 1 retrogene
retro_ttru_87,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3475 78.96 78.36
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Download FASTA sequences of all ENSMUSG00000030934 retrocopies