Parental gene:

OAT, ENSCJAG00000012633

Aliases:None
Description:ornithine aminotransferase [Source:HGNC Symbol;Acc:8091]
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:112365392..112380805(-)


>ENSCJAG00000012633
ATGTTTTCCAAACTAGCACATCTGCAGAGGTTTGCTGTACTTAGTCGTGGAGTTCATTCTTCAGTGGCTTCTGCTACATC
AGTTGCAACTAAAAGAACAGTCCAAGGCCCTCCAAGTTCTGATTACATTTTTGAAAGAGAATCTAAGTATGGTGCGCACA
ATTACCATCCTTTACCTGTAGCTCTGGAGAGAGGAAAAGGTATTTACTTATGGGATGTAGAAGGCAGAAAATATTTTGAC
TTCCTGAGTTCTTACAGTGCTGTCAACCAAGGGCATTGTCACCCCAAGATTGTGAATGCTCTGAAGAGTCAGGCGGACAT
ACTGACCCTAACATCTAGAGCTTTCTATAATAACGTACTTGGTGAATATGAGGAGTATATTACTAAACTTTTCAACTACC
ACAAAGTTCTTCCTATGAATACAGGAGTGGAGGCTGGAGAGACTGCCTGTAAACTGGCTCGTAGGTGGGGCTATACTGTG
AAGGGCATTCCGAAATACAAAGCAAAGGTTGTTTTTGCAGCTGGAAACTTTTGGGGTAGGACGTTGTCTGCTATCTCCAG
TTCCACAGACCCGACCAGTTACGATGGTTTTGGACCGTTCATGCCAGGATTTGACGTCATTCCCTATAATGACCTTCCTG
CACTGGAGCGTGCTCTTCAGGATCCAAATGTGGCTGCGTTCATGGTAGAGCCAATTCAGGGTGAAGCAGGCGTTGTTGTT
CCGGATCCCGGTTACCTGTTGGGAGTGCGAGAGCTCTGCACCAGGCACCAGGTCCTGTTTATTGCTGATGAAATACAGAC
AGGATTGGCCAGAACTGGTAGATGGCTGGCTGTTGATCATGAAAATGTCAGACCTGATATAGTCCTCCTTGGAAAGGCCC
TTTCTGGGGGCTTATATCCGGTGTCTGCGGTGCTGTGTGATGATGACATAATGCTGACCATTAAGCCAGGGGAGCATGGG
TCCACATACGGTGGCAATCCACTCGGCTCCCGAGTGGCCATCGCAGCCCTTGAGGTCTTAGAAGAAGAAAACCTTGCTGA
AAATGCAGAAAAACTGGGCATTATCTTGAGAAATGAACTCATGAAGCTGCCTTCTGATGTTGTAACTGCTGTGAGAGGAA
AAGGATTATTGAATGCTATTGTTATTAAAGAAACCAAAGATTGTGATGCTTGGAAGGTGTGTCTGCGACTTCGAGATAAT
GGACTTCTGGCCAAGCCGACCCATGGTGACATCATCAGGTTTGCGCCTCCGCTGGTAATCAAGGAGGATGAGATCCTAGA
GTCCATTGAAATTATTAACAAGACCATCTTGTCTTTCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 38 .09 RPM
SRP051959_skeletal_muscle 32 .74 RPM
SRP051959_lymph_node 26 .67 RPM
SRP051959_lung 66 .94 RPM
SRP051959_liver 25 .58 RPM
SRP051959_kidney 134 .51 RPM
SRP051959_heart 55 .32 RPM
SRP051959_colon 102 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000065154 ortholog_one2one 1 retrogene
retro_hsap_4828,
Gorilla gorilla ENSGGOG00000000848 ortholog_one2one 1 retrogene
retro_ggor_3010,
Macropus eugenii ENSMEUG00000005655 ortholog_one2one 1 retrogene
retro_meug_613,
Mus musculus ENSMUSG00000030934 ortholog_one2one 1 retrogene
retro_mmus_3475,
Nomascus leucogenys ENSNLEG00000000482 ortholog_one2one 2 retrogenes
retro_nleu_2176, retro_nleu_503,
Pongo abelii ENSPPYG00000002737 ortholog_one2one 2 retrogenes
retro_pabe_2989, retro_pabe_3754,
Pan troglodytes ENSPTRG00000003028 ortholog_one2one 1 retrogene
retro_ptro_3213,
Sus scrofa ENSSSCG00000010734 ortholog_one2one 1 retrogene
retro_sscr_1181,
Tursiops truncatus ENSTTRG00000004225 ortholog_one2one 1 retrogene
retro_ttru_87,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2462 93.00 77.90
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Download FASTA sequences of all ENSCJAG00000012633 retrocopies