Parental gene:

RNF138, ENSOPRG00000011494

Aliases:None
Description:ring finger protein 138, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:17765]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_820:95356..129930(+)


>ENSOPRG00000011494
ATGGCCGAGGAGCTTTCCACGGCCACATCTTACACCGAAGATGATTTCTACTGTCCCGTCTGTCAGGAGGTGCTCAAAAC
GCCGGTACGGACCTCGGCCTGTCAGCACGTTTTCTGTAGAAAATGTTTCCTGACTGCAATGAGAGAAAGTGGAATACATT
GTCCCCTGTGTCGTGGAAATGTGACTAGAAAAGAAAGAGCATGTCCCGAACGGGCCTTAGACCTTGAAAATATCATGAGG
AAGTTTTCTGGTAGCTGCAGATGCTGTGCAAAACAGATTAAATTCTATCGCATGAGACATCATTACAAATCTTGCAAGAA
GTATCAAGATGAATATGGTGTGTCTTCTGTCATTCCAAACTTACAGATTTCCCAAGATTCAGGAGGGAACAGTAATAGGA
GTGAAACATCTACGTCAGATACCATAGAAACTTACCAAGAGAATACAAGTTCTTCTGGACATCCCACCTTTAAGTGTCCC
TTGTGTCAAGAATCAAATCTTACCAGACAGCGTTTATTGGATCACTGTAACAGTAATCACCTATTTCAGATAGTTCCTGT
GACATGTCCTATTTGCGTGTCTCTTCCTTGGGGAGATCCTACCCAGATTACTAGAAATTTCGTCAGTCATCTAAATCAAA
GGCATCAGTTTGATTATGGAGAATTTGTGAATCTTCAGCTAGATGAGGAGACTCAGTACCAAACTGCTGTTGAAGAATCT
TTTCAAGTAAATATCTGA

Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000009856 ortholog_one2one 1 retrogene
retro_eeur_430,
Monodelphis domestica ENSMODG00000010850 ortholog_one2many 4 retrogenes
retro_mdom_1468, retro_mdom_387, retro_mdom_708, retro_mdom_725,
Mus musculus ENSMUSG00000024317 ortholog_one2one 2 retrogenes
retro_mmus_3726, retro_mmus_494,
Ochotona princeps ENSOPRG00000004732 within_species_paralog 2 retrogenes
retro_opri_368, retro_opri_709,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_554 97.49 95.10
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Download FASTA sequences of all ENSOPRG00000011494 retrocopies