Parental gene: | RNF114, ENSOPRG00000004732 |
| Aliases: | None |
| Description: | ring finger protein 114 [Source:HGNC Symbol;Acc:13094] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_1704:3868..17143(+) |
>ENSOPRG00000004732
ATGGCGGCGCAGCAGCAGGACCGTGGGGCCCCCTCGCAGCCGGCAGGCCCCGCGGCGGAGACCGACCCCTTGAGCCGCTT
CACCTGTCCCGTGTGCTTAGAGGTGTACGACAAGCCGATGCAGGTGCCCTGCGGACACGTCTTTTGCTCTGCATGCCTGC
AGGAGTGCCTGAAGCCGAAGAAGCCTGTCTGTGGGGTGTGTCGCAACGCTCTGGCCCCTGGCGTCCCAGCTGCGGAGCTT
GAGCGACAGATCGAGCGCACAGAGACTTCCTGCCATGGCTGCCGTAAGAATTTCTTCCTTTCCAAGATCCGGGCCCACGT
GGCTACCTGTTCCAAATACCAGAGTTACATCATGGAAGGCGTGAAGGCCACCACCAAGGACACGTCCCTGCAGCAAAGGA
ACGTCCCAAACCGGTACACCTTCCCATGTCCTTACTGTCCGGAAAGAAACTTTGATCAGGAAGGACTTGTGGAGCACTGC
AAATTATCCCACAGCACGGACACCAGATCTGTGGTATGTCCCATCTGCGCCTCAATGCCCTGGGGAGACCCCAGCTACCG
CAGCGCCAACTTCATGCAGCACATCCAGCGCCGGCACCAGTTTTCTTACGACACTTTTGTGGACTATGATGTGGATGAAG
AGGACATGATGAACCAGGTGTTGCAGCGCTCCATCATCGACCAGTGA
ATGGCGGCGCAGCAGCAGGACCGTGGGGCCCCCTCGCAGCCGGCAGGCCCCGCGGCGGAGACCGACCCCTTGAGCCGCTT
CACCTGTCCCGTGTGCTTAGAGGTGTACGACAAGCCGATGCAGGTGCCCTGCGGACACGTCTTTTGCTCTGCATGCCTGC
AGGAGTGCCTGAAGCCGAAGAAGCCTGTCTGTGGGGTGTGTCGCAACGCTCTGGCCCCTGGCGTCCCAGCTGCGGAGCTT
GAGCGACAGATCGAGCGCACAGAGACTTCCTGCCATGGCTGCCGTAAGAATTTCTTCCTTTCCAAGATCCGGGCCCACGT
GGCTACCTGTTCCAAATACCAGAGTTACATCATGGAAGGCGTGAAGGCCACCACCAAGGACACGTCCCTGCAGCAAAGGA
ACGTCCCAAACCGGTACACCTTCCCATGTCCTTACTGTCCGGAAAGAAACTTTGATCAGGAAGGACTTGTGGAGCACTGC
AAATTATCCCACAGCACGGACACCAGATCTGTGGTATGTCCCATCTGCGCCTCAATGCCCTGGGGAGACCCCAGCTACCG
CAGCGCCAACTTCATGCAGCACATCCAGCGCCGGCACCAGTTTTCTTACGACACTTTTGTGGACTATGATGTGGATGAAG
AGGACATGATGAACCAGGTGTTGCAGCGCTCCATCATCGACCAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000009113 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000011155 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003953 | ortholog_one2one | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000011494 | within_species_paralog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000004117 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001827 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_368 | 81.43 | 58.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_709 | 86.67 | 58.77 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000004732 retrocopies