Parental gene: | Rnf138, ENSMUSG00000024317 |
| Aliases: | Rnf138, 2410015A17Rik, 2810480D20Rik, STRIN, Trif, Trif-d |
| Description: | ring finger protein 138 [Source:MGI Symbol;Acc:MGI:1929211] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 18:21001340..21028223(+) |
>ENSMUSG00000024317
ATGTCCGAGGAACTTTCGGCGGCCACGTCCTACACGGAAGATGATTTCTACTGCCCTGTCTGTCAGGAGGTGCTCAAGAC
GCCGGTGCGGACCGCGGCCTGTCAGCACGTTTTCTGTAGAAAATGTTTCCTGACTGCAATGAGAGAAAGTGGAATACATT
GTCCCCTATGTCGTGGAAGTGTGACTAGAAGAGAAAGAGCATGTCCGGAACGGGCCTTAGATCTTGAAAATATCATGAGG
AGGTTTTCTGGTAGCTGCAGATGCTGTTCAAAAAAGATTAAATTCTATCGCATGAGACATCATTACAAATCTTGTAAGAA
GTATCAGGATGAATATGGTGTTTCTTCTGTCATTCCAAACTTTAAGATTTCTCAAGATTCAGTAAGGAGCAGTAATAGGA
GTGAAACATCTGCATCTGATAACACAGAAACTTATCAAGAGGATACAAGTTCTTCTGGGCATCCTACCTTTAAGTGTCCC
TTATGTCAAGAGTCAAATTTCACCAGACAACGTTTATTGGATCACTGTAATAGTAACCACCTATTTCAGATAGTTCCTGT
GACATGTCCTATTTGTGTGTCTCTTCCTTGGGGAGATCCTAGCCAGATTACTAGAAATTTCGTTAGTCATCTAAATCAAA
GACATCAGTTTGATTATGGAGAATTTGTGAATCTTCAGCTAGATGAGGAAACCCAATATCAAACTGCTGTGGAAGAGTCT
TTTCAAGTAAACATGTGA
ATGTCCGAGGAACTTTCGGCGGCCACGTCCTACACGGAAGATGATTTCTACTGCCCTGTCTGTCAGGAGGTGCTCAAGAC
GCCGGTGCGGACCGCGGCCTGTCAGCACGTTTTCTGTAGAAAATGTTTCCTGACTGCAATGAGAGAAAGTGGAATACATT
GTCCCCTATGTCGTGGAAGTGTGACTAGAAGAGAAAGAGCATGTCCGGAACGGGCCTTAGATCTTGAAAATATCATGAGG
AGGTTTTCTGGTAGCTGCAGATGCTGTTCAAAAAAGATTAAATTCTATCGCATGAGACATCATTACAAATCTTGTAAGAA
GTATCAGGATGAATATGGTGTTTCTTCTGTCATTCCAAACTTTAAGATTTCTCAAGATTCAGTAAGGAGCAGTAATAGGA
GTGAAACATCTGCATCTGATAACACAGAAACTTATCAAGAGGATACAAGTTCTTCTGGGCATCCTACCTTTAAGTGTCCC
TTATGTCAAGAGTCAAATTTCACCAGACAACGTTTATTGGATCACTGTAATAGTAACCACCTATTTCAGATAGTTCCTGT
GACATGTCCTATTTGTGTGTCTCTTCCTTGGGGAGATCCTAGCCAGATTACTAGAAATTTCGTTAGTCATCTAAATCAAA
GACATCAGTTTGATTATGGAGAATTTGTGAATCTTCAGCTAGATGAGGAAACCCAATATCAAACTGCTGTGGAAGAGTCT
TTTCAAGTAAACATGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 9 .06 RPM |
| SRP007412_cerebellum | 4 .86 RPM |
| SRP007412_heart | 3 .18 RPM |
| SRP007412_kidney | 6 .14 RPM |
| SRP007412_liver | 6 .31 RPM |
| SRP007412_testis | 217 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000009856 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000010850 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000033107 | within_species_paralog | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000011494 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_494 | 70.42 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3726 | 68.29 | 99.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000024317 retrocopies