Parental gene: | UBE2D3, ENSOGAG00000012860 |
| Aliases: | None |
| Description: | ubiquitin-conjugating enzyme E2D 3 [Source:HGNC Symbol;Acc:12476] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873622.1:2237519..2253814(-) |
>ENSOGAG00000012860
ACAGCAATCTCTAGAATATCCCAGGAACTTAGTGATTTGGCCCGTGACCCTCCAGCACAGTGTTCTGCAGGTCCAGTTGG
GGATGATATGTTTCATTGGCAAGCCACAATTATGGGACCTAATGACAGCCCATATCAAGGTGGTGTATTCTTTTTGACAA
TTCACTTTCCTACAGACTACCCCTTCAAACCACCTAAGGTTGCATTTACAACAAGAATTTATCATCCAAATATTAACAGT
AATGGCAGCATTTGTCTCGATATTCTAAGATCACAGTGGTCTCCTGCTTTAACTATTTCTAAAGTTCTTTTATCCATTTG
TTCACTGTTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCACGGATCTATAAAACAGACAGAGATAAGT
ACAATAGGTTAGCAAGAGAGTGGACAGAGAAATACGCTATGTTGTAG
ACAGCAATCTCTAGAATATCCCAGGAACTTAGTGATTTGGCCCGTGACCCTCCAGCACAGTGTTCTGCAGGTCCAGTTGG
GGATGATATGTTTCATTGGCAAGCCACAATTATGGGACCTAATGACAGCCCATATCAAGGTGGTGTATTCTTTTTGACAA
TTCACTTTCCTACAGACTACCCCTTCAAACCACCTAAGGTTGCATTTACAACAAGAATTTATCATCCAAATATTAACAGT
AATGGCAGCATTTGTCTCGATATTCTAAGATCACAGTGGTCTCCTGCTTTAACTATTTCTAAAGTTCTTTTATCCATTTG
TTCACTGTTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCACGGATCTATAAAACAGACAGAGATAAGT
ACAATAGGTTAGCAAGAGAGTGGACAGAGAAATACGCTATGTTGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ciona intestinalis | ENSCING00000018711 | ortholog_one2many | 2 retrogenes | |
| Ciona savignyi | ENSCSAVG00000006136 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000010820 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000014658 | possible_ortholog | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000001291 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000001368 | possible_ortholog | 2 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000005415 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007527 | other_paralog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014956 | other_paralog | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000014967 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000015438 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000024306 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000029822 | possible_ortholog | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000000270 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_544 | 83.17 | 68.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_599 | 83.22 | 95.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ogar_1124 | 87.92 | 98.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ogar_3047 | 89.15 | 87.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ogar_3048 | 76.87 | 98.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ogar_3110 | 78.38 | 98.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000012860 retrocopies