Parental gene:

SUMO3, ENSOGAG00000004715

Aliases:None
Description:small ubiquitin-like modifier 3 [Source:HGNC Symbol;Acc:11124]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873647.1:4167755..4177810(-)


>ENSOGAG00000004715
ATGTCCGAGGAGAAGCCCAAGGAGGGAGTGAAGACAGAGAATGACCACATCAACCTGAAGGTGGCGGGGCAGGACGGCTC
CGTGGTGCAGTTCAAGATCAAGAGACACACCCCTTTGAGCAAGCTGATGAAGGCCTACTGCGAGAGGCAGGGCTTGTCAA
TGAGACAGATTAGATTTAGGTTTGATGGGCAACCGATTAATGAAACAGATACTCCAGCACAGCTGGAGATGGAGGATGAA
GACACCATCGATGTGTTCCAACAGCAGACAGGAGGCTGGTGGGAGACCAGCTGCCCGCTGGGCATGGCCTCT

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017321 ortholog_one2one 3 retrogenes
retro_btau_1730, retro_btau_580, retro_btau_701,
Bos taurus ENSBTAG00000030169 possible_ortholog 8 retrogenes
retro_btau_1047, retro_btau_1484, retro_btau_1804, retro_btau_260, retro_btau_344, retro_btau_489, retro_btau_582, retro_btau_895,
Callithrix jacchus ENSCJAG00000010529 possible_ortholog 20 retrogenes
retro_cjac_1110, retro_cjac_1128, retro_cjac_1525, retro_cjac_1752, retro_cjac_1938, retro_cjac_1957, retro_cjac_1993, retro_cjac_2460, retro_cjac_2481, retro_cjac_2616, retro_cjac_2651, retro_cjac_2886, retro_cjac_2899, retro_cjac_2985, retro_cjac_3088, retro_cjac_3137, retro_cjac_4123, retro_cjac_711, retro_cjac_771, retro_cjac_774,
Cavia porcellus ENSCPOG00000025203 ortholog_one2one 3 retrogenes
retro_cpor_328, retro_cpor_645, retro_cpor_963,
Felis catus ENSFCAG00000026550 possible_ortholog 4 retrogenes
retro_fcat_1210, retro_fcat_1947, retro_fcat_823, retro_fcat_836,
Homo sapiens ENSG00000184900 ortholog_one2one 4 retrogenes
retro_hsap_1675, retro_hsap_1841, retro_hsap_3672, retro_hsap_4103,
Myotis lucifugus ENSMLUG00000025342 possible_ortholog 4 retrogenes
retro_mluc_1502, retro_mluc_272, retro_mluc_340, retro_mluc_625,
Myotis lucifugus ENSMLUG00000028601 possible_ortholog 2 retrogenes
retro_mluc_1321, retro_mluc_2494,
Macaca mulatta ENSMMUG00000006760 ortholog_one2many 3 retrogenes
retro_mmul_2131, retro_mmul_2215, retro_mmul_47,
Mustela putorius furo ENSMPUG00000010234 possible_ortholog 1 retrogene
retro_mputfur_1504,
Mustela putorius furo ENSMPUG00000013954 possible_ortholog 9 retrogenes
retro_mputfur_1086, retro_mputfur_1403, retro_mputfur_1535, retro_mputfur_273, retro_mputfur_275, retro_mputfur_385, retro_mputfur_666, retro_mputfur_948, retro_mputfur_995,
Mus musculus ENSMUSG00000020265 ortholog_one2one 1 retrogene
retro_mmus_3548,
Nomascus leucogenys ENSNLEG00000002351 ortholog_one2one 9 retrogenes
retro_nleu_1084, retro_nleu_1253, retro_nleu_1736, retro_nleu_2052, retro_nleu_21, retro_nleu_2128, retro_nleu_3039, retro_nleu_523, retro_nleu_572,
Oryctolagus cuniculus ENSOCUG00000021739 possible_ortholog 4 retrogenes
retro_ocun_1024, retro_ocun_1631, retro_ocun_1690, retro_ocun_321,
Otolemur garnettii ENSOGAG00000030345 within_species_paralog 1 retrogene
retro_ogar_215,
Rattus norvegicus ENSRNOG00000003670 possible_ortholog 2 retrogenes
retro_rnor_418, retro_rnor_67,
Rattus norvegicus ENSRNOG00000038489 ortholog_one2one 1 retrogene
retro_rnor_2158,
Ictidomys tridecemlineatus ENSSTOG00000010587 possible_ortholog 2 retrogenes
retro_itri_116, retro_itri_1259,
Ictidomys tridecemlineatus ENSSTOG00000024685 possible_ortholog 10 retrogenes
retro_itri_1017, retro_itri_1123, retro_itri_1355, retro_itri_202, retro_itri_264, retro_itri_272, retro_itri_79, retro_itri_921, retro_itri_981, retro_itri_983,
Takifugu rubripes ENSTRUG00000014892 possible_ortholog 1 retrogene
retro_trub_25,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_328 95.70 88.46
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2. retro_ogar_371 72.83 86.54
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3. retro_ogar_419 72.34 88.46
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4. retro_ogar_526 80.43 87.50
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5. retro_ogar_967 74.29 66.35
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6. retro_ogar_1199 61.54 61.54
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7. retro_ogar_1646 85.00 76.92
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8. retro_ogar_1945 82.80 88.46
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9. retro_ogar_2958 74.74 88.46
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10. retro_ogar_3469 95.88 93.27
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Download FASTA sequences of all ENSOGAG00000004715 retrocopies