Parental gene:

ENSOCUG00000021494

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:16:31438120..31457338(-)


>ENSOCUG00000021494
GCAAGCCAAAATTCCTTCAGGACAGAATATGATACCTTTGGGGAACTCAAGGTCCCAAATGATAAGTATTATGGTGCCCA
GACTGTGAGATCTACAATGAACTTCAAGATTGGAGGTGTGACGGAACGCATGCCAATTCCAGTTATTAAAGCTTTTGGCA
TCTTGAAGCGAGCAGCTGCTGAAGTAAACCAGGATTATGGTCTTGATCCAAAGATCGCCAATGCAATAATGAAGGCAGCA
GATGAGGTAGCTGAAGGTAAATTAAATGATCATTTTCCTCTCGTGATATGGCAGACTGGATCGGGAACCCAGACAAATAT
GAATGTAAATGAAGTCATTAGCAACAGAGCAATTGAGATGTTGGGAGGTGAACTTGGCAGTAAAAAACCTGTGCATCCCA
ATGATCATGTTAATAAAAGCCAGAGTTCAAATGATACTTTCCCCACAGCAATGCACATTGCTGCTGCAATAGAAGTTCAT
GAAGTACTCTTACCAGGACTCCAGAAGTTACATGATGCTCTGGAAGCAAAATCCAAAGAGTTTGCTCAGATCATCAAAAT
TGGACGAACTCATACTCAGGATGCTGTTCCACTTACTCTTGGTCAGGAATTCAGTGGTTATGTTCAACAAGTGAAATATG
CAATGGCGAGAATAAAAGCTGCCATGCCAAGAATCTATGAGCTCGCAGCTGGAGGCACTGCTGTTGGTACTGGCTTAAAT
ACTAGAATTGGCTTTGCAGAAAAGGTTGCTGCGAAGGTGGCTGCCCTCACAGGCTTGCCTTTTGTCACTGCTCCAAATAA
ATTTGAAGCTCTGGCTGCTCATGATGCTCTGGTTGAGCTCAGTGGAGCCATGAACACGACTGCTTGCAGTCTGATGAAGA
TAGCAAATGATGTTCGTTTTCTGGGTTCTGGCCCTCGGTCAGGCCTGGGAGAATTGATCTTGCGTCATGATTCTGTCACT
GGTGATTTTCTTGAAGGCAAGGTGAACCCTACTCAGTGTGAAGCAATGACCATGGTTGCAGCCCAGGTCATGGGGAATCA
TGTTGCTGTTACAGTTGGAGGCAGCAATGGACATTTTGAGCTGAATGTTTTCAAGCCAATGATGATTAAAAATGTGTTGC
ACTCAGCCAGACTGCTAGGGGATGCTTCAGTTTCCTTCACAGAAAACTGTGTCCTGGGGATCCAGGCTAACACAGAAAGG
ATCAATAAGCTAATGAATGAGTCTCTAATGTTGGTGACAGCTCTCAATCCACATATAGGATATGACAAGGCAGCAAAGAT
TGCTAAGACAGCACACAAAAATGGATCAACCTTGAAAGAAACTGCTATTGAACTTGGGTATCTCACAGCAGAGCAGTTTG
ATGAGTGGGTGAAACCTAAAGACATGCTGGGTCCGAAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 15 .57 RPM
SRP017611_kidney 51 .69 RPM
SRP017611_brain 13 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017359 ortholog_one2many 1 retrogene
retro_cjac_2339,
Echinops telfairi ENSETEG00000018721 ortholog_one2many 2 retrogenes
retro_etel_1069, retro_etel_1457,
Microcebus murinus ENSMICG00000003451 ortholog_one2many 2 retrogenes
retro_mmur_1215, retro_mmur_720,
Mus musculus ENSMUSG00000026526 ortholog_one2many 1 retrogene
retro_mmus_3600,
Otolemur garnettii ENSOGAG00000009936 ortholog_one2many 1 retrogene
retro_ogar_322,
Rattus norvegicus ENSRNOG00000003653 ortholog_one2many 1 retrogene
retro_rnor_2979,
Xenopus tropicalis ENSXETG00000032112 ortholog_one2many 1 retrogene
retro_xtro_55,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_50 96.78 100.00
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Download FASTA sequences of all ENSOCUG00000021494 retrocopies