Parental gene: | RPF1, ENSOCUG00000014803 |
| Aliases: | None |
| Description: | ribosome production factor 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30350] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 13:80459506..80475660(-) |
>ENSOCUG00000014803
ATGGCGAAGGCCGCGGATAAGACCGGCAGTGGAGGGAAGAAAAATCTGAAAAGGAAAGCCGTTACCGAAGAACCGCAGGA
GGCTACAGTCGCTGGGGATGAGGCGACAGAAAGTGGGGTTCAGCCCGCGAAAGCGGCTGCGTTTCCCCCAGGTTTCAGCA
TTTCCGAGATTAAGAACAAACAGCGGCGACACTTAATGTTCACGCGGTGGAAACAGCAGCAGCGCAAGGAAAAGTTGGCA
GCTAAGAAAAAACTTAAAAAACAGAGAGAGGCTCTTGGTGATAAGGCTCCACCAAAGCCTGTACCCAAGACCATTGACAA
CCAGCGCGTGTATGATGAAACCATAGTAGACCCTAATGATGAAGAGGTTGCTTATGATGAAGCTACAGATGAATTTGCTT
CTTACTTCAACAGACAAACTTCTCCCAAGATTCTCATCACAACATCAGATAGACCTCATGGGAGAACAGTAAAACTTTGT
GAACAGCTCTCCACAGTTATACCAAACTCACATGTTTATTACAGAAGAGGACTGGCTCTGAAAAAAATTATTCCACAGTG
CATTTCAAGAGATTTCACAGATCTGATTGTTATTAATGAAGATCGTAAAACACCAAATGGACTGATTTTGAGTCACTTGC
CAAATGGTCCAACTGCTCATTTTAAAATGAGCAGTGTTCGTCTTCGTAAAGAAATTAAGAGAAGAGGCAAGGACCCCACA
GAACACAGACCTGAAATAATTCTGAATAATTTTACAACACGGCTAGGTCATTCTATTGGTCGTATGTTTGCTTCTCTCTT
TCCCCATAATCCTCAGTTTATTGGAAGGCAAGTTGCTACATTCCATAATCAGCGGGATTATATCTTCTTCAGATTTCACA
GATACATATTCAAGAGTGAAAAGAAAGCAGGAATTCAGGAACTTGGACCACGTTTTACCTTAAAATTAAGATCTCTTCAG
AAAGGAACCTTTGATTCTAAATATGGAGAATATGAATGGGTCCATAAGCCCCGGGAAATGGACACAAGTAGAAGAAAATT
TCATTTGTAA
ATGGCGAAGGCCGCGGATAAGACCGGCAGTGGAGGGAAGAAAAATCTGAAAAGGAAAGCCGTTACCGAAGAACCGCAGGA
GGCTACAGTCGCTGGGGATGAGGCGACAGAAAGTGGGGTTCAGCCCGCGAAAGCGGCTGCGTTTCCCCCAGGTTTCAGCA
TTTCCGAGATTAAGAACAAACAGCGGCGACACTTAATGTTCACGCGGTGGAAACAGCAGCAGCGCAAGGAAAAGTTGGCA
GCTAAGAAAAAACTTAAAAAACAGAGAGAGGCTCTTGGTGATAAGGCTCCACCAAAGCCTGTACCCAAGACCATTGACAA
CCAGCGCGTGTATGATGAAACCATAGTAGACCCTAATGATGAAGAGGTTGCTTATGATGAAGCTACAGATGAATTTGCTT
CTTACTTCAACAGACAAACTTCTCCCAAGATTCTCATCACAACATCAGATAGACCTCATGGGAGAACAGTAAAACTTTGT
GAACAGCTCTCCACAGTTATACCAAACTCACATGTTTATTACAGAAGAGGACTGGCTCTGAAAAAAATTATTCCACAGTG
CATTTCAAGAGATTTCACAGATCTGATTGTTATTAATGAAGATCGTAAAACACCAAATGGACTGATTTTGAGTCACTTGC
CAAATGGTCCAACTGCTCATTTTAAAATGAGCAGTGTTCGTCTTCGTAAAGAAATTAAGAGAAGAGGCAAGGACCCCACA
GAACACAGACCTGAAATAATTCTGAATAATTTTACAACACGGCTAGGTCATTCTATTGGTCGTATGTTTGCTTCTCTCTT
TCCCCATAATCCTCAGTTTATTGGAAGGCAAGTTGCTACATTCCATAATCAGCGGGATTATATCTTCTTCAGATTTCACA
GATACATATTCAAGAGTGAAAAGAAAGCAGGAATTCAGGAACTTGGACCACGTTTTACCTTAAAATTAAGATCTCTTCAG
AAAGGAACCTTTGATTCTAAATATGGAGAATATGAATGGGTCCATAAGCCCCGGGAAATGGACACAAGTAGAAGAAAATT
TCATTTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 4 .78 RPM |
| SRP017611_kidney | 16 .22 RPM |
| SRP017611_brain | 12 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000001097 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016028 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000028187 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000003729 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000015969 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013600 | ortholog_one2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1133 | 94.84 | 60.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000014803 retrocopies