Parental gene: | PFDN1, ENSOCUG00000009432 |
| Aliases: | None |
| Description: | prefoldin subunit 1 [Source:HGNC Symbol;Acc:8866] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:22388861..22455831(-) |
>ENSOCUG00000009432
ATGGCGGCCCCCGTGGATCTGGAGTTGAAGAAGGCCTTCACAGAGCTTCAAGCCAAAGTTATTGACACTCAACAGAAAGT
GAAGCTTGCAGACATACAGATTGAGCAACTGAACAGAACGAAAAAACATGCACATCTTACAGATACAGAAATTATGACTT
TGGTAGATGAGACTAACATGTATGAAGGCGTAGGAAGAATGTTTATTCTTCAATCCAAGGAGGTAATTCACAATCAGCTG
TTAGAGAAACAGAAAATAGCAGAAGAAAAAATTAAAGAACTAGAACAGAAAAAGTCCTACCTGGAGCGGAGCGTTAAGGA
AGCAGAGGACAACATCCGGGAGATGCTGATGGCACGAAGGGCACAGTAG
ATGGCGGCCCCCGTGGATCTGGAGTTGAAGAAGGCCTTCACAGAGCTTCAAGCCAAAGTTATTGACACTCAACAGAAAGT
GAAGCTTGCAGACATACAGATTGAGCAACTGAACAGAACGAAAAAACATGCACATCTTACAGATACAGAAATTATGACTT
TGGTAGATGAGACTAACATGTATGAAGGCGTAGGAAGAATGTTTATTCTTCAATCCAAGGAGGTAATTCACAATCAGCTG
TTAGAGAAACAGAAAATAGCAGAAGAAAAAATTAAAGAACTAGAACAGAAAAAGTCCTACCTGGAGCGGAGCGTTAAGGA
AGCAGAGGACAACATCCGGGAGATGCTGATGGCACGAAGGGCACAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .71 RPM |
| SRP017611_kidney | 32 .03 RPM |
| SRP017611_brain | 32 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005742 | possible_ortholog | 8 retrogenes | |
| Equus caballus | ENSECAG00000011843 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019281 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000001272 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002726 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000000349 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003376 | ortholog_one2one | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018653 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_804 | 79.51 | 99.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_999 | 60.67 | 72.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1049 | 71.88 | 77.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ocun_1885 | 91.46 | 67.21 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000009432 retrocopies