Parental gene: | ENSOCUG00000001832 |
| Aliases: | None |
| Description: | None |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018704:5250672..5270728(+) |
>ENSOCUG00000001832
ATGGCTCCCAGCGTGCCAGCAGGCGAACCCGAGCACCCTAAAGGCATCCGGGCCGTGCTGCTGGGGCCGCCCGGGGCTGG
CAAAGGTACCCAGGCACCCAGATTGGCTGAAAATTTCTGTGTCTGCCATTTGGCCACTGGGGACATGCTGAGGGCCATGG
TAGCTTCTGGCTCAGAGCTGGGAAAAAAGCTAAAGGCAACTATGGATGCTGGGAAACTGGTGAGTGACGAAATGGTCGTG
GAGCTTATTGAGAAGAACCTAGAGACCCCTTCGTGCAAGAATGGTTTTCTTCTGGATGGCTTCCCTCGCACTGTGAGGCA
GGCAGAAATGCTTGACAACCTCATGGAGAAGCGGAAAGAGAAGCTTGATTCTGTGATTGAATTCAGTATCCCAGATTCCC
TGCTGATCCGGAGAATCACAGGAAGGCTGATTCACCCCACAAGTGGACGTTCCTACCACGAGGAGTTCAATCCCCCAAAG
GAACCCATGAAAGATGACATCACTGGAGAACCCTTGATCCGTCGATCAGATGATAACGAGAAAGCCTTGAAAATCCGCCT
GGAGGCCTACCACACTCAGACCACCCCGCTTGTGGAGTACTACAGGAAACGGGGCATCCACGCTGCCGTCGATGCGTCCC
AGACCCCGGATGTCGTGTTTGCGTGCATCCTCGCAGCCTTCTCCAAAGCCACATGTAAAGACCTGGTTATGTTTATATAA
ATGGCTCCCAGCGTGCCAGCAGGCGAACCCGAGCACCCTAAAGGCATCCGGGCCGTGCTGCTGGGGCCGCCCGGGGCTGG
CAAAGGTACCCAGGCACCCAGATTGGCTGAAAATTTCTGTGTCTGCCATTTGGCCACTGGGGACATGCTGAGGGCCATGG
TAGCTTCTGGCTCAGAGCTGGGAAAAAAGCTAAAGGCAACTATGGATGCTGGGAAACTGGTGAGTGACGAAATGGTCGTG
GAGCTTATTGAGAAGAACCTAGAGACCCCTTCGTGCAAGAATGGTTTTCTTCTGGATGGCTTCCCTCGCACTGTGAGGCA
GGCAGAAATGCTTGACAACCTCATGGAGAAGCGGAAAGAGAAGCTTGATTCTGTGATTGAATTCAGTATCCCAGATTCCC
TGCTGATCCGGAGAATCACAGGAAGGCTGATTCACCCCACAAGTGGACGTTCCTACCACGAGGAGTTCAATCCCCCAAAG
GAACCCATGAAAGATGACATCACTGGAGAACCCTTGATCCGTCGATCAGATGATAACGAGAAAGCCTTGAAAATCCGCCT
GGAGGCCTACCACACTCAGACCACCCCGCTTGTGGAGTACTACAGGAAACGGGGCATCCACGCTGCCGTCGATGCGTCCC
AGACCCCGGATGTCGTGTTTGCGTGCATCCTCGCAGCCTTCTCCAAAGCCACATGTAAAGACCTGGTTATGTTTATATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 92 .88 RPM |
| SRP017611_kidney | 68 .31 RPM |
| SRP017611_brain | 6 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000017605 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000010390 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001105 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000014113 | ortholog_one2many | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000002333 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000004455 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000069 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000793 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006284 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017363 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003152 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000818 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005023 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001579 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000499 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000122 | ortholog_one2many | 3 retrogenes | |
| Sorex araneus | ENSSARG00000000202 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000024355 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000016042 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008979 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_445 | 59.02 | 50.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1280 | 94.85 | 96.65 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000001832 retrocopies