Parental gene: | HSPD1, ENSNLEG00000006874 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397263.1:41520580..41534154(-) |
>ENSNLEG00000006874
ATGCTTCGGTTACCCACAGTCTTTCGCCAGATGAGACCGGTGTCCAGGGTACTGGCTCCTCATCTCACTCGGGCTTATGC
CAAAGATGTAAAATTTGGTGCAGATGCCCGAGCCTTAATGCTTCAAGGTGTAGACCTTTTAGCCGATGCTGTGGCCGTTA
CAATGGGGCCAAAGGGAAGAACAGTGATTATTGAGCAGAGTTGGGGAAGTCCCAAAGTAACAAAAGATGGTGTGACTGTT
GCGAAGTCAATTGACTTAAAGGATAAATATAAAAACATTGGAGCTAAACTTGTTCAAGATGTTGCCAATAACACAAATGA
AGAGGCTGGGGATGGCACTACCACTGCTACTGTACTGGCACGCTCTATAGCCAAGGAAGGCTTCGAGAAGATTAGCAAAG
GTGCTAATCCAGTGGAAATCAGGAGAGGTGTGATGTTAGCTGTTGATGCTGTAATTGCTGAACTTAAAAAGCAGTCTAAA
CCTGTGACCACCCCTGAAGAAATTGCACAGGTTGCTACGATTTCTGCAAATGGAGACAAAGAAATTGGCAATATCATCTC
TGATGCAATGAAAAAGGTTGGAAGAAAGGGTGTCATCACAGTAAAGGCAAGTGATGGAAAAACACTGAATGATGAATTAG
AAATTATTGAAGGCATGAAGTTTGATCGAGGCTATATTTCTCCATACTTTATTAATACATCAAAAGGTCAGAAATGTGAA
TTCCAGGATGCCTATGTTCTGTTGAGTGAAAAGAAAATTTCTAGTGTCCAGTCCATTGTACCTGCTCTTGAAATTGCCAA
TGCTCACCGTAAGCCTTTGGTCATAATCGCTGAAGATGTTGATGGAGAAGCTCTAAGTACACTCGTCTTGAATAGGCTAA
AGGTTGGTCTTCAGGTTGTGGCAGTCAAGGCTCCAGGGTTTGGTGACAATAGAAAGAACCAGCTGAAAGATATGGCTATT
GCTACTGGTGGTGCAGTTTTTGGAGAAGAGGGGTTGACTCTGAATCTTGAAGACGTTCAGCCTCATGACTTAGGAAAAGT
TGGAGAGGTCATTGTGACCAAAGATGATGCCATGCTCTTAAAAGGAAAAGGTGACAAGGCTCAAATTGAAAAACGTATTC
AAGAAATCATTGAGCAGTTAGATGTCACAACTAGTGAATATGAAAAGGAAAAACTGAATGAACGGCTTGCAAAACTTTCT
GATGGAGTAGCTGTGCTGAAGGTTGGTGGGACAAGTGATGTTGAAGTGAATGAAAAGAAAGACAGAGTTACAGATGCCCT
TAATGCTACGAGAGCTGCTGTAGAAGAAGGCATTGTTTTGGGAGGGGGTTGTGCCCTGCTTCGATGCATTCCAGCCTTGG
ACTCACTGACTCCAGCTAATGAAGATCAAAAAATCGGTATAGAAATTATTAAAAGAACACTCAAAATTCCAGCAATGACC
ATTGCTAAGAATGCAGGTGTTGAAGGATCTTTGATAGTTGAGAAAATTATGCAAAGTTCCTCAGAAGTTGGTTATGATGC
TATGGTTGGAGATTTTGTGAATATGGTGGAAAAAGGAATTATTGACCCAACAAAGGTTGTGAGAACTGCTTTATTGGATG
CTGCTGGTGTGGCCTCTCTGTTAACTACAGCAGAAGTTGTAGTCACAGAAATTCCTAAAGAAGAGAAGGACCCTGGAATG
GGTGCAATGGGTGGAATGGGAGGTGGTATGGGAGGTGGCATGTTCTAA
ATGCTTCGGTTACCCACAGTCTTTCGCCAGATGAGACCGGTGTCCAGGGTACTGGCTCCTCATCTCACTCGGGCTTATGC
CAAAGATGTAAAATTTGGTGCAGATGCCCGAGCCTTAATGCTTCAAGGTGTAGACCTTTTAGCCGATGCTGTGGCCGTTA
CAATGGGGCCAAAGGGAAGAACAGTGATTATTGAGCAGAGTTGGGGAAGTCCCAAAGTAACAAAAGATGGTGTGACTGTT
GCGAAGTCAATTGACTTAAAGGATAAATATAAAAACATTGGAGCTAAACTTGTTCAAGATGTTGCCAATAACACAAATGA
AGAGGCTGGGGATGGCACTACCACTGCTACTGTACTGGCACGCTCTATAGCCAAGGAAGGCTTCGAGAAGATTAGCAAAG
GTGCTAATCCAGTGGAAATCAGGAGAGGTGTGATGTTAGCTGTTGATGCTGTAATTGCTGAACTTAAAAAGCAGTCTAAA
CCTGTGACCACCCCTGAAGAAATTGCACAGGTTGCTACGATTTCTGCAAATGGAGACAAAGAAATTGGCAATATCATCTC
TGATGCAATGAAAAAGGTTGGAAGAAAGGGTGTCATCACAGTAAAGGCAAGTGATGGAAAAACACTGAATGATGAATTAG
AAATTATTGAAGGCATGAAGTTTGATCGAGGCTATATTTCTCCATACTTTATTAATACATCAAAAGGTCAGAAATGTGAA
TTCCAGGATGCCTATGTTCTGTTGAGTGAAAAGAAAATTTCTAGTGTCCAGTCCATTGTACCTGCTCTTGAAATTGCCAA
TGCTCACCGTAAGCCTTTGGTCATAATCGCTGAAGATGTTGATGGAGAAGCTCTAAGTACACTCGTCTTGAATAGGCTAA
AGGTTGGTCTTCAGGTTGTGGCAGTCAAGGCTCCAGGGTTTGGTGACAATAGAAAGAACCAGCTGAAAGATATGGCTATT
GCTACTGGTGGTGCAGTTTTTGGAGAAGAGGGGTTGACTCTGAATCTTGAAGACGTTCAGCCTCATGACTTAGGAAAAGT
TGGAGAGGTCATTGTGACCAAAGATGATGCCATGCTCTTAAAAGGAAAAGGTGACAAGGCTCAAATTGAAAAACGTATTC
AAGAAATCATTGAGCAGTTAGATGTCACAACTAGTGAATATGAAAAGGAAAAACTGAATGAACGGCTTGCAAAACTTTCT
GATGGAGTAGCTGTGCTGAAGGTTGGTGGGACAAGTGATGTTGAAGTGAATGAAAAGAAAGACAGAGTTACAGATGCCCT
TAATGCTACGAGAGCTGCTGTAGAAGAAGGCATTGTTTTGGGAGGGGGTTGTGCCCTGCTTCGATGCATTCCAGCCTTGG
ACTCACTGACTCCAGCTAATGAAGATCAAAAAATCGGTATAGAAATTATTAAAAGAACACTCAAAATTCCAGCAATGACC
ATTGCTAAGAATGCAGGTGTTGAAGGATCTTTGATAGTTGAGAAAATTATGCAAAGTTCCTCAGAAGTTGGTTATGATGC
TATGGTTGGAGATTTTGTGAATATGGTGGAAAAAGGAATTATTGACCCAACAAAGGTTGTGAGAACTGCTTTATTGGATG
CTGCTGGTGTGGCCTCTCTGTTAACTACAGCAGAAGTTGTAGTCACAGAAATTCCTAAAGAAGAGAAGGACCCTGGAATG
GGTGCAATGGGTGGAATGGGAGGTGGTATGGGAGGTGGCATGTTCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013770 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000010865 | possible_ortholog | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003990 | ortholog_one2one | 6 retrogenes | |
| Echinops telfairi | ENSETEG00000009184 | possible_ortholog | 4 retrogenes | |
| Homo sapiens | ENSG00000144381 | ortholog_one2one | 7 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008267 | ortholog_one2one | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000000053 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000011987 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000871 | possible_ortholog | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000010489 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012289 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000007818 | possible_ortholog | 3 retrogenes | |
| Mus musculus | ENSMUSG00000025980 | ortholog_one2one | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000034053 | possible_ortholog | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000013046 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014525 | ortholog_one2many | 9 retrogenes | |
| Xenopus tropicalis | ENSXETG00000007509 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_229 | 94.27 | 84.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_657 | 84.57 | 81.57 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_675 | 84.54 | 52.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_nleu_691 | 78.24 | 50.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_nleu_787 | 76.67 | 51.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_nleu_1349 | 93.79 | 92.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_nleu_2238 | 87.09 | 68.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000006874 retrocopies