Parental gene: | Snip1, ENSMUSG00000050213 |
| Aliases: | Snip1, 2410133M08Rik |
| Description: | Smad nuclear interacting protein 1 [Source:MGI Symbol;Acc:MGI:2156003] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 4:125066671..125074042(+) |
>ENSMUSG00000050213
ATGAAGGCGGGGAAAAGCGAGCGGGAGCGGAGCGGCCGGCGGCGACACCGGTCAGGCGACGCTCTGACGACCGTGGTGGT
GAAACAGGAGCGTCTGAGCCCCGAACCCGTCGCGCACCGCCGGCCCGACGCTCCAGCCGCTAGCCTGTCCCCGCCCGCCG
CCGAGCCTGGCCACTCGGGTCACCGCGGGAGCCGAGCCCGGTCCCCAGCCAAGAAGAAAAGCAAGTCCTCTGGGAGAAGA
AGCAAGTCACCACGGACCAAGAGAAGCCAGAGTCCCCACTACCCCATGGTCAAAGTGAAGCAGGAACGTGAGGACCATCC
TCGGAGAGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCGGAACAGTGAGCGAGACC
GGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGTCAGTGGACAGGATCGGGATAGAGACAGCCAG
AACCTGCAGGCCCAGGAAGAAGAGAGGGACTTTCATAATGCCAGGCGCCGGGAGCACCGCCAGCAGAATGAAAGTGCTGG
CAGTGAGGCTCAGGAGGTGATCCCTCGTCCTGCTGGGAACAGAAGCAAAGAGGTGCCCGTTAAAGAGAAACCAAGCTTTG
AACTTTCTGGGGCACTTCTTGAGGACACCAATACCTTCCGGGGTGTGGTTATTAAATACAGTGAGCCCCCAGAAGCCCGG
ATCCCCAAAAAACGGTGGCGCCTCTACCCCTTTAAAAATGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGC
ATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCC
AGTACCGGCTTGTGGAGTACACCCGTGCTGACGGCACGGTTGGTCGGAGGGTGAAGCCCTACATTATCGACCTTGGCTCA
GGCAATGGAACATTCTTGAACAACAAGCGTATTGAGCCACAGAGATATTATGAACTGAAAGAAAAAGACGTACTTAAATT
TGGGTTCAGTAGCAGAGAATATGTCTTGCTTCATGAGTCTTCAGACACCTCTGAACTTGACAGGAAGGAAGATGAAGATG
ATGAGGAGGAAGAAATGGTATCTGACAGCTAG
ATGAAGGCGGGGAAAAGCGAGCGGGAGCGGAGCGGCCGGCGGCGACACCGGTCAGGCGACGCTCTGACGACCGTGGTGGT
GAAACAGGAGCGTCTGAGCCCCGAACCCGTCGCGCACCGCCGGCCCGACGCTCCAGCCGCTAGCCTGTCCCCGCCCGCCG
CCGAGCCTGGCCACTCGGGTCACCGCGGGAGCCGAGCCCGGTCCCCAGCCAAGAAGAAAAGCAAGTCCTCTGGGAGAAGA
AGCAAGTCACCACGGACCAAGAGAAGCCAGAGTCCCCACTACCCCATGGTCAAAGTGAAGCAGGAACGTGAGGACCATCC
TCGGAGAGGACGAGAGGATCGGCAGCACCGGGAACCATCAGAACAGGAGCACAGGAGAGCTCGGAACAGTGAGCGAGACC
GGCACCGGGGCCATTCCCGCCAAGGGAGGAGCTCTGATGAGAGGCCCGTCAGTGGACAGGATCGGGATAGAGACAGCCAG
AACCTGCAGGCCCAGGAAGAAGAGAGGGACTTTCATAATGCCAGGCGCCGGGAGCACCGCCAGCAGAATGAAAGTGCTGG
CAGTGAGGCTCAGGAGGTGATCCCTCGTCCTGCTGGGAACAGAAGCAAAGAGGTGCCCGTTAAAGAGAAACCAAGCTTTG
AACTTTCTGGGGCACTTCTTGAGGACACCAATACCTTCCGGGGTGTGGTTATTAAATACAGTGAGCCCCCAGAAGCCCGG
ATCCCCAAAAAACGGTGGCGCCTCTACCCCTTTAAAAATGATGAGGTACTTCCAGTCATGTACATCCATCGGCAGAGTGC
ATACCTTCTGGGTAGACATCGACGCATCGCAGACATTCCCATCGACCATCCCTCTTGCTCAAAGCAACATGCAGTCTTCC
AGTACCGGCTTGTGGAGTACACCCGTGCTGACGGCACGGTTGGTCGGAGGGTGAAGCCCTACATTATCGACCTTGGCTCA
GGCAATGGAACATTCTTGAACAACAAGCGTATTGAGCCACAGAGATATTATGAACTGAAAGAAAAAGACGTACTTAAATT
TGGGTTCAGTAGCAGAGAATATGTCTTGCTTCATGAGTCTTCAGACACCTCTGAACTTGACAGGAAGGAAGATGAAGATG
ATGAGGAGGAAGAAATGGTATCTGACAGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 10 .21 RPM |
| SRP007412_cerebellum | 10 .73 RPM |
| SRP007412_heart | 8 .00 RPM |
| SRP007412_kidney | 9 .49 RPM |
| SRP007412_liver | 10 .73 RPM |
| SRP007412_testis | 30 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001963 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017132 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008634 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_941 | 81.52 | 87.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3038 | 81.74 | 85.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000050213 retrocopies