Parental gene: | SNIP1, ENSCJAG00000001963 |
| Aliases: | None |
| Description: | Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:30587] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:71926314..71943150(-) |
>ENSCJAG00000001963
ATGAAGGCGGTGAAGAGCGAACGGGAGCGAGGGAGCCGGCGAAGACACCGGGACGTGGATGTGGTGCTGCCGGCGACGGT
GGTGGTGAAGCAGGAGCGTCTCAGCCCGGAAGCCGCCCCTCCCGCCCACCGTCGTCCGGACCACTCCGGCGGTAGCCCTT
CCCCGCCGGCCAGCGAGCCGAGCCGCCCGGGCCACCGCGGGAACCGAGCCCGAGGAGTTAGCCGGTCCCCACCCAAAAAG
AAAAACAAGTCCTCAGGGAGAAGAAGCAAGTCTCCTCGGAGTAAGAGGACCCGAAGTCCTCACCACTCAACAGTCAAAGT
GAAGCAGGAGCGTGAGGATCATCCCAGGAGAGGACGGGAGGATCGGCAGCACAGGGAACCATCGGAACAGGAACACAGGA
GAGCCAGGAACAGTGACCGGGACAGACACCGGGGCCATTCCCACCAAAGGAGAACGTCTGACGAGAGGCCTGGGAGTGGG
CAGGGTCAGGGACGGGATCGAGACACTCAGAACCTGCAGGCTCAGGAAGACGAGCGGGTGTTTTATAATGCCAGGCGACG
GGAGCATCGCCAGAGGAATGACGTTGGTGGCGGTGGTAGTGAGACTCAGGAGTTGGTTCCTCAGCCTGGTGGTAACAACA
AAGAAAAAGAGGTGCCTGTTAAAGAAAAACCAAGCTTTGAACTTTCTGGGGCACTTCTTGAGGACACCAACACTTTTCGG
GGTGTAGTCATTAAATATAGTGAGCCCCCAGAAGCACGTATCCCCAAAAAACGGTGGCGTCTCTACCCGTTTAAAAATGA
TGAGGTGCTGCCAGTCATGTACATACATCGACAGAGCGCATACCTGCTGGGTCGACACCGCCGCATTGCAGACATTCCAA
TCGATCACCCGTCTTGTTCAAAGCAGCATGCGGTCTTTCAATATCGGCTTGTGGAATATACCCGTGCTGATGGCACGGTT
GGCCGAAGAGTGAAGCCCTACATCATTGACCTCGGCTCAGGCAATGGAACCTTCTTAAACAACAAACGTATTGAGCCACA
GAGATACTATGAACTAAAAGAAAAGGATGTACTCAAATTTGGGTTCAGTAGCAGAGAATACGTCTTGCTCCATGAGTCGT
CAGACACTTCTGAAATAGACAGGAAAGACGACGAGGATGAGGAGGAGGAGGAAGAAGTGTCTGACAGCTAG
ATGAAGGCGGTGAAGAGCGAACGGGAGCGAGGGAGCCGGCGAAGACACCGGGACGTGGATGTGGTGCTGCCGGCGACGGT
GGTGGTGAAGCAGGAGCGTCTCAGCCCGGAAGCCGCCCCTCCCGCCCACCGTCGTCCGGACCACTCCGGCGGTAGCCCTT
CCCCGCCGGCCAGCGAGCCGAGCCGCCCGGGCCACCGCGGGAACCGAGCCCGAGGAGTTAGCCGGTCCCCACCCAAAAAG
AAAAACAAGTCCTCAGGGAGAAGAAGCAAGTCTCCTCGGAGTAAGAGGACCCGAAGTCCTCACCACTCAACAGTCAAAGT
GAAGCAGGAGCGTGAGGATCATCCCAGGAGAGGACGGGAGGATCGGCAGCACAGGGAACCATCGGAACAGGAACACAGGA
GAGCCAGGAACAGTGACCGGGACAGACACCGGGGCCATTCCCACCAAAGGAGAACGTCTGACGAGAGGCCTGGGAGTGGG
CAGGGTCAGGGACGGGATCGAGACACTCAGAACCTGCAGGCTCAGGAAGACGAGCGGGTGTTTTATAATGCCAGGCGACG
GGAGCATCGCCAGAGGAATGACGTTGGTGGCGGTGGTAGTGAGACTCAGGAGTTGGTTCCTCAGCCTGGTGGTAACAACA
AAGAAAAAGAGGTGCCTGTTAAAGAAAAACCAAGCTTTGAACTTTCTGGGGCACTTCTTGAGGACACCAACACTTTTCGG
GGTGTAGTCATTAAATATAGTGAGCCCCCAGAAGCACGTATCCCCAAAAAACGGTGGCGTCTCTACCCGTTTAAAAATGA
TGAGGTGCTGCCAGTCATGTACATACATCGACAGAGCGCATACCTGCTGGGTCGACACCGCCGCATTGCAGACATTCCAA
TCGATCACCCGTCTTGTTCAAAGCAGCATGCGGTCTTTCAATATCGGCTTGTGGAATATACCCGTGCTGATGGCACGGTT
GGCCGAAGAGTGAAGCCCTACATCATTGACCTCGGCTCAGGCAATGGAACCTTCTTAAACAACAAACGTATTGAGCCACA
GAGATACTATGAACTAAAAGAAAAGGATGTACTCAAATTTGGGTTCAGTAGCAGAGAATACGTCTTGCTCCATGAGTCGT
CAGACACTTCTGAAATAGACAGGAAAGACGACGAGGATGAGGAGGAGGAGGAAGAAGTGTCTGACAGCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 9 .31 RPM |
| SRP051959_skeletal_muscle | 5 .98 RPM |
| SRP051959_lymph_node | 12 .63 RPM |
| SRP051959_lung | 10 .53 RPM |
| SRP051959_liver | 5 .09 RPM |
| SRP051959_kidney | 6 .28 RPM |
| SRP051959_heart | 6 .30 RPM |
| SRP051959_colon | 8 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000017132 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000050213 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000008634 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1094 | 69.44 | 71.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001963 retrocopies