Parental gene: | Tubb4b, ENSMUSG00000036752 |
| Aliases: | Tubb4b, 4930542G03Rik, Tubb2c, Tubb2c1 |
| Description: | tubulin, beta 4B class IVB [Source:MGI Symbol;Acc:MGI:1915472] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:25222159..25224702(-) |
>ENSMUSG00000036752
ATGAGGGAGATCGTGCACCTGCAGGCTGGGCAGTGCGGCAACCAGATTGGCGCCAAGTTCTGGGAGGTAATCAGCGACGA
GCATGGCATTGATCCCACTGGCACTTACCACGGAGATAGCGACCTCCAGCTGGAGCGCATCAACGTGTACTACAACGAAG
CCACCGGTGGCAAGTATGTGCCCCGCGCCGTGCTCGTGGACTTGGAGCCCGGCACCATGGACTCGGTGCGTTCAGGGCCC
TTCGGGCAGATCTTCAGACCTGATAACTTCGTCTTTGGTCAGAGTGGGGCTGGGAACAACTGGGCCAAGGGGCACTACAC
AGAAGGTGCAGAGCTGGTTGACTCGGTGTTGGACGTTGTGAGAAAGGAAGCTGAGAGCTGTGACTGCCTGCAGGGCTTCC
AGCTGACCCACTCCCTGGGTGGGGGGACTGGGTCTGGGATGGGTACCCTCCTTATCAGCAAGATCCGGGAGGAGTACCCA
GACAGAATCATGAACACCTTCAGTGTGGTACCTTCCCCCAAGGTGTCGGACACAGTGGTTGAGCCCTACAATGCCACCCT
TTCAGTCCACCAGCTGGTTGAAAACACAGATGAGACCTATTGTATTGATAATGAAGCACTTTATGACATCTGCTTCAGAA
CCCTAAAGCTGACCACACCCACTTACGGTGACCTGAACCATCTAGTGTCCGCCACCATGAGTGGGGTAACCACTTGCCTG
CGATTCCCTGGCCAGCTAAATGCTGACCTGCGGAAACTGGCTGTAAATATGGTGCCCTTCCCTCGCCTGCACTTCTTCAT
GCCTGGCTTTGCCCCCTTGACCAGCCGGGGCAGCCAGCAGTACCGTGCCCTGACAGTTCCTGAGCTCACCCAGCAGATGT
TTGATGCCAAGAACATGATGGCTGCCTGTGATCCAAGACATGGGCGCTACTTGACTGTGGCTGCCGTGTTCAGGGGCCGC
ATGTCTATGAAGGAGGTGGACGAACAGATGCTTAATGTCCAAAACAAGAACAGCAGCTACTTTGTTGAGTGGATCCCCAA
CAATGTGAAGACAGCTGTCTGTGACATTCCACCTCGGGGCCTGAAAATGTCGGCCACCTTCATTGGCAACAGCACCGCTA
TTCAGGAGCTGTTCAAACGCATCTCAGAGCAGTTCACAGCCATGTTCCGACGCAAGGCCTTCCTACACTGGTACACGGGT
GAAGGCATGGATGAGATGGAGTTCACTGAGGCTGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGA
CGCTACAGCTGAGGAAGAGGGAGAGTTTGAGGAGGAGGCTGAGGAGGAGGTGGCTTAG
ATGAGGGAGATCGTGCACCTGCAGGCTGGGCAGTGCGGCAACCAGATTGGCGCCAAGTTCTGGGAGGTAATCAGCGACGA
GCATGGCATTGATCCCACTGGCACTTACCACGGAGATAGCGACCTCCAGCTGGAGCGCATCAACGTGTACTACAACGAAG
CCACCGGTGGCAAGTATGTGCCCCGCGCCGTGCTCGTGGACTTGGAGCCCGGCACCATGGACTCGGTGCGTTCAGGGCCC
TTCGGGCAGATCTTCAGACCTGATAACTTCGTCTTTGGTCAGAGTGGGGCTGGGAACAACTGGGCCAAGGGGCACTACAC
AGAAGGTGCAGAGCTGGTTGACTCGGTGTTGGACGTTGTGAGAAAGGAAGCTGAGAGCTGTGACTGCCTGCAGGGCTTCC
AGCTGACCCACTCCCTGGGTGGGGGGACTGGGTCTGGGATGGGTACCCTCCTTATCAGCAAGATCCGGGAGGAGTACCCA
GACAGAATCATGAACACCTTCAGTGTGGTACCTTCCCCCAAGGTGTCGGACACAGTGGTTGAGCCCTACAATGCCACCCT
TTCAGTCCACCAGCTGGTTGAAAACACAGATGAGACCTATTGTATTGATAATGAAGCACTTTATGACATCTGCTTCAGAA
CCCTAAAGCTGACCACACCCACTTACGGTGACCTGAACCATCTAGTGTCCGCCACCATGAGTGGGGTAACCACTTGCCTG
CGATTCCCTGGCCAGCTAAATGCTGACCTGCGGAAACTGGCTGTAAATATGGTGCCCTTCCCTCGCCTGCACTTCTTCAT
GCCTGGCTTTGCCCCCTTGACCAGCCGGGGCAGCCAGCAGTACCGTGCCCTGACAGTTCCTGAGCTCACCCAGCAGATGT
TTGATGCCAAGAACATGATGGCTGCCTGTGATCCAAGACATGGGCGCTACTTGACTGTGGCTGCCGTGTTCAGGGGCCGC
ATGTCTATGAAGGAGGTGGACGAACAGATGCTTAATGTCCAAAACAAGAACAGCAGCTACTTTGTTGAGTGGATCCCCAA
CAATGTGAAGACAGCTGTCTGTGACATTCCACCTCGGGGCCTGAAAATGTCGGCCACCTTCATTGGCAACAGCACCGCTA
TTCAGGAGCTGTTCAAACGCATCTCAGAGCAGTTCACAGCCATGTTCCGACGCAAGGCCTTCCTACACTGGTACACGGGT
GAAGGCATGGATGAGATGGAGTTCACTGAGGCTGAGAGCAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGA
CGCTACAGCTGAGGAAGAGGGAGAGTTTGAGGAGGAGGCTGAGGAGGAGGTGGCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 107 .19 RPM |
| SRP007412_cerebellum | 92 .70 RPM |
| SRP007412_heart | 76 .24 RPM |
| SRP007412_kidney | 65 .66 RPM |
| SRP007412_liver | 31 .05 RPM |
| SRP007412_testis | 443 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016380 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000011966 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010939 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012164 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000017213 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000016255 | other_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005927 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000023373 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000010170 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_158 | 98.20 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_422 | 94.28 | 74.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000036752 retrocopies