Parental gene:

TUBB4B, ENSCPOG00000011966

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_18:38136733..38138830(-)


>ENSCPOG00000011966
ATGAGGGAGATCGTCCACCTGCAGGCCGGGCAGTGCGGCAACCAGATCGGCGCAAAGTTCTGGGAGGTGATCAGCGACGA
ACATGGCATTGACCCTACTGGCACATACCATGGAGACAGCGACCTGCAATTGGAGCGCATTAACGTGTATTACAACGAGG
CCACGGGTGGCAAGTACGTTCCCCGCGCCGTCCTGGTGGATCTGGAGCCTGGCACCATGGACTCTGTACGCTCAGGGCCC
TTCGGGCAGATATTCAGGCCTGACAACTTTGTCTTTGGTCAGAGTGGTGCTGGGAACAATTGGGCCAAGGGGCATTACAC
AGAAGGTGCAGAGCTGGTGGATTCGGTTCTGGATGTTGTGAGAAAGGAAGCAGAGAGCTGTGACTGCCTGCAGGGTTTCC
AGCTGACCCACTCCCTGGGTGGGGGGACCGGGTCCGGGATGGGTACCCTCCTCATCAGCAAGATCCGGGAAGAGTACCCA
GACCGGATCATGAACACGTTCAGTGTGGTGCCCTCCCCCAAAGTGTCGGACACAGTGGTCGAGCCTTACAATGCCACCCT
CTCAGTCCACCAGCTTGTAGAAAACACAGATGAAACCTATTGCATTGATAATGAAGCCCTGTATGACATCTGCTTCAGAA
CCCTAAAGCTTACCACGCCCACCTACGGTGACCTAAACCACCTGGTGTCAGCCACCATGAGTGGGGTCACTACCTGCCTG
CGCTTCCCTGGCCAGCTCAATGCTGACCTGCGAAAGCTGGCTGTGAACATGGTGCCCTTCCCCCGCCTGCACTTCTTCAT
GCCTGGCTTTGCTCCCCTGACCAGCCGAGGCAGCCAGCAGTACCGGGCCTTGACGGTGCCCGAGCTCACCCAGCAGATGT
TTGACGCCAAGAACATGATGGCTGCCTGTGATCCCCGCCATGGCCGCTACCTGACAGTGGCCGCGGTGTTCAGGGGACGC
ATGTCCATGAAGGAGGTGGATGAACAGATGCTTAATGTCCAAAACAAGAATAGCAGCTATTTCGTCGAGTGGATCCCCAA
CAACGTGAAGACAGCTGTTTGTGACATCCCACCCCGGGGGCTAAAAATGTCGGCCACCTTCATTGGCAACAGCACAGCCA
TCCAGGAGCTGTTCAAGCGCATCTCAGAGCAGTTTACGGCCATGTTCCGTCGCAAGGCCTTCCTGCACTGGTACACAGGT
GAAGGTATGGATGAGATGGAGTTCACCGAGGCCGAGAGTAACATGAACGACCTGGTGTCCGAGTACCAGCAGTACCAGGA
CGCCACGGCTGAGGAAGAGGGCGAGTTTGAGGAGGAAGCTGAGGAGGAGGTGGCATAG

Library Parental gene expression (RPM)
SRP017611_liver 58 .33 RPM
SRP017611_kidney 133 .90 RPM
SRP017611_brain 195 .38 RPM
SRP040447_lung 188 .50 RPM
SRP040447_skeletal_muscle 131 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Microcebus murinus ENSMICG00000010939 ortholog_one2one 1 retrogene
retro_mmur_792,
Macaca mulatta ENSMMUG00000012164 ortholog_one2one 2 retrogenes
retro_mmul_1849, retro_mmul_2533,
Monodelphis domestica ENSMODG00000017213 ortholog_one2one 1 retrogene
retro_mdom_117,
Mus musculus ENSMUSG00000036752 ortholog_one2one 2 retrogenes
retro_mmus_158, retro_mmus_422,
Otolemur garnettii ENSOGAG00000005927 ortholog_one2one 2 retrogenes
retro_ogar_3410, retro_ogar_3450,
Pan troglodytes ENSPTRG00000023373 ortholog_one2one 2 retrogenes
retro_ptro_2403, retro_ptro_3166,
Rattus norvegicus ENSRNOG00000010170 ortholog_one2one 2 retrogenes
retro_rnor_742, retro_rnor_867,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_497 66.67 75.73
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Download FASTA sequences of all ENSCPOG00000011966 retrocopies