Parental gene:

Lpcat2, ENSMUSG00000033192

Aliases:Lpcat2, A330042H22, Aytl1, Aytl1a, lpafat1
Description:lysophosphatidylcholine acyltransferase 2 [Source:MGI Symbol;Acc:MGI:3606214]
Organism:Mouse (Mus musculus)
Coordinates:8:92855349..92919279(+)


>ENSMUSG00000033192
ATGAACCGATGCGCCGAGGCGGCCGCTGTGGCGGCTACGGTCCCGGGTTCGGGCGTCGGGGACGCCGGGCTGCGGCCACC
CATGGTACCTCGCCAGGCGTCCTTCTTCCCGCCGCCGGTGCCCAACCCCTTCGTCCAGCAGACTACGATCAGTGCCTCCC
GAAGGCTGCAGATGTTTCTTCTTGGAATTATTCTGCTCCCAGTCCGTGCTTTACTGGTTGGAATAATTTTGCTGCTCGCA
TGGCCATTTGCTGTCATTTCAACAGCATGCTGTCCTGAAAAGCTGACCCATCCAATAAGCAATTGGAGGAGGAAGATCAC
TCGGCCCGCTTTGACATTTCTGGCGCGTGCCATGTTCTTCTCCATGGGGTTTACGGTTACCGTGAAAGGAAAGGTTGCAA
GCCCTCTGGAAGCGCCCATTTTTGTCGTCGCTCCTCATTCCACGTTCTTCGACGGAATTGCCTGTGTAGTAGCTGGGCTG
CCTTCGCTGGTATCACGGAATGAGAATGCACAGACCCCTCTGGTTGGCAGACTGTTACGGGCTTTGCAGCCAGTTTTGGT
ATCCCGTGTTGACCCTGACTCCCGAAAAAACACAATCAATGAAATCAAAAAGCGAGCGACATCAGGTGGAGAATGGCCCC
AGATACTAGTTTTCCCAGAAGGTACTTGTACTAATCGCTCCTGTTTGATTACTTTTAAACCAGGAGCCTTCATCCCAGGA
GTTCCAGTGCAGCCCGTCCTCCTCAGATACCCAAACAAGTTGGATACTGTGACCTGGACCTGGCAAGGCTATACATTCCT
CCAGCTGTGTGTGCTCACTTTCTGTCAACTCTTCACGAAGGTGGAGATTGAGTTTATGCCTGTGCAAGCACCCAGTGAGG
AAGAGAAGAACGATCCTGTCCTTTTCGCCAGTAGAATCCGGAACTTAATGGCTGAAGCATTGGAAATACCCGTGACGGAT
CACACCTACGAAGACTGCAGGCTGATGATCTCAGCGGGACAGCTCACGTTGCCTATGGAGGCCGGGCTGGTAGAATTTTC
AAAGATTAGCCGGAAACTGAAATTAGACTGGGATGGTATCCGGAAGCACTTGGATGAATATGCGTCTATCGCAAGCTCTT
CCAAAGGAGGCAGAATTGGAATCGAGGAGTTTGCGGAATACTTGAAGCTACCTGTTTCCGATGTCCTGAGACAACTTTTT
GCACTCTTTGACAGGAATAATGATGGCAGTATTGACTTCCGAGAGTATGTGATCGGCCTGGCTGTCTTGTGCAACCCTGC
CAATACAGAAGAGATCATCCAGGTGGCATTTAAGCTCTTTGATGTTGATGAGGACGGCTACATAACAGAGGAGGAGTTTT
GCACCATTCTGCAGGCTTCTCTTGGAGTGCCTGACCTTAATGTTTCTGGTCTCTTCAGAGAAATTGCCCAACGGGACTCT
GTTTCCTACGAGGAATTCAAAAGTTTCGCCCTAAAGCACCCAGAATATGCCAAGATATTTACCACATACCTAGACCTCCA
GACATGCCATGTATTCTCCTTGCCAGAAGAGGTCCAGACAGCTCCCTCTGTTGCTAGTAATAAAGTCAGTCCTGAGAGCC
AGGAGGAGGGCACCTCAGACAAAAAGGTGGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 8 .34 RPM
SRP007412_cerebellum 4 .52 RPM
SRP007412_heart 1 .49 RPM
SRP007412_kidney 2 .04 RPM
SRP007412_liver 3 .36 RPM
SRP007412_testis 0 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019272 ortholog_one2one 1 retrogene
retro_btau_64,
Callithrix jacchus ENSCJAG00000012902 ortholog_one2one 1 retrogene
retro_cjac_2945,
Dasypus novemcinctus ENSDNOG00000006859 ortholog_one2one 1 retrogene
retro_dnov_1735,
Dipodomys ordii ENSDORG00000013193 ortholog_one2one 1 retrogene
retro_dord_399,
Equus caballus ENSECAG00000009649 ortholog_one2one 1 retrogene
retro_ecab_865,
Erinaceus europaeus ENSEEUG00000014277 ortholog_one2one 1 retrogene
retro_eeur_109,
Homo sapiens ENSG00000087253 ortholog_one2one 1 retrogene
retro_hsap_185,
Gorilla gorilla ENSGGOG00000005144 ortholog_one2one 1 retrogene
retro_ggor_266,
Loxodonta africana ENSLAFG00000003965 ortholog_one2one 1 retrogene
retro_lafr_66,
Myotis lucifugus ENSMLUG00000004008 ortholog_one2one 1 retrogene
retro_mluc_88,
Macaca mulatta ENSMMUG00000004478 ortholog_one2one 1 retrogene
retro_mmul_392,
Nomascus leucogenys ENSNLEG00000001258 ortholog_one2one 1 retrogene
retro_nleu_994,
Pongo abelii ENSPPYG00000007358 ortholog_one2one 1 retrogene
retro_pabe_445,
Pan troglodytes ENSPTRG00000008124 ortholog_one2one 2 retrogenes
retro_ptro_171, retro_ptro_2928,
Pteropus vampyrus ENSPVAG00000007801 ortholog_one2one 1 retrogene
retro_pvam_173,
Rattus norvegicus ENSRNOG00000016643 ortholog_one2one 1 retrogene
retro_rnor_309,
Sorex araneus ENSSARG00000011914 ortholog_one2one 1 retrogene
retro_sara_88,
Sarcophilus harrisii ENSSHAG00000012383 ortholog_one2one 1 retrogene
retro_shar_116,
Tursiops truncatus ENSTTRG00000001182 ortholog_one2one 1 retrogene
retro_ttru_188,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_270 63.66 89.15
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Download FASTA sequences of all ENSMUSG00000033192 retrocopies