Parental gene:

Txn1, ENSMUSG00000028367

Aliases:Txn1, ADF, AW550880, Trx1, Txn
Description:thioredoxin 1 [Source:MGI Symbol;Acc:MGI:98874]
Organism:Mouse (Mus musculus)
Coordinates:4:57943372..57956411(-)


>ENSMUSG00000028367
ATGGTGAAGCTGATCGAGAGCAAGGAAGCTTTTCAGGAGGCCCTGGCCGCCGCGGGAGACAAGCTTGTCGTGGTGGACTT
CTCTGCTACGTGGTGTGGACCTTGCAAAATGATCAAGCCCTTCTTCCATTCCCTCTGTGACAAGTATTCCAATGTGGTGT
TCCTTGAAGTGGATGTGGATGACTGCCAGGATGTTGCTGCAGACTGTGAAGTCAAATGCATGCCGACCTTCCAGTTTTAT
AAAAAGGGTCAAAAGGTGGGGGAGTTCTCCGGTGCTAACAAGGAAAAGCTTGAAGCCTCTATTACTGAATATGCCTAA

Library Parental gene expression (RPM)
SRP007412_brain 30 .54 RPM
SRP007412_cerebellum 27 .53 RPM
SRP007412_heart 46 .76 RPM
SRP007412_kidney 153 .28 RPM
SRP007412_liver 181 .33 RPM
SRP007412_testis 9 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013018 ortholog_one2many 3 retrogenes
retro_acar_112, retro_acar_121, retro_acar_122,
Choloepus hoffmanni ENSCHOG00000011506 ortholog_one2one 10 retrogenes
retro_chof_1111, retro_chof_127, retro_chof_1557, retro_chof_1680, retro_chof_1696, retro_chof_240, retro_chof_2424, retro_chof_317, retro_chof_617, retro_chof_82,
Callithrix jacchus ENSCJAG00000017321 ortholog_one2many 5 retrogenes
retro_cjac_1407, retro_cjac_2536, retro_cjac_2733, retro_cjac_3010, retro_cjac_69,
Cavia porcellus ENSCPOG00000015348 ortholog_one2many 5 retrogenes
retro_cpor_1048, retro_cpor_49, retro_cpor_54, retro_cpor_55, retro_cpor_74,
Dasypus novemcinctus ENSDNOG00000019205 ortholog_one2one 20 retrogenes
retro_dnov_100, retro_dnov_1047, retro_dnov_1122, retro_dnov_1222, retro_dnov_1353, retro_dnov_1403, retro_dnov_1404, retro_dnov_1628, retro_dnov_1634, retro_dnov_1646, retro_dnov_1949, retro_dnov_1996, retro_dnov_2069, retro_dnov_2197, retro_dnov_2239, retro_dnov_290, retro_dnov_466, retro_dnov_593, retro_dnov_843, retro_dnov_852,
Echinops telfairi ENSETEG00000003065 ortholog_one2one 13 retrogenes
retro_etel_1173, retro_etel_1256, retro_etel_1672, retro_etel_1725, retro_etel_1807, retro_etel_1831, retro_etel_1932, retro_etel_1956, retro_etel_320, retro_etel_389, retro_etel_737, retro_etel_903, retro_etel_926,
Homo sapiens ENSG00000136810 ortholog_one2one 7 retrogenes
retro_hsap_1713, retro_hsap_206, retro_hsap_2330, retro_hsap_3052, retro_hsap_3614, retro_hsap_405, retro_hsap_736,
Gorilla gorilla ENSGGOG00000006925 ortholog_one2many 6 retrogenes
retro_ggor_1283, retro_ggor_1769, retro_ggor_2440, retro_ggor_35, retro_ggor_401, retro_ggor_620,
Loxodonta africana ENSLAFG00000012856 ortholog_one2one 2 retrogenes
retro_lafr_372, retro_lafr_93,
Macropus eugenii ENSMEUG00000003515 ortholog_one2many 8 retrogenes
retro_meug_1198, retro_meug_1204, retro_meug_1603, retro_meug_192, retro_meug_2170, retro_meug_2175, retro_meug_539, retro_meug_840,
Microcebus murinus ENSMICG00000002128 ortholog_one2one 2 retrogenes
retro_mmur_118, retro_mmur_717,
Macaca mulatta ENSMMUG00000010322 ortholog_one2many 1 retrogene
retro_mmul_167,
Otolemur garnettii ENSOGAG00000009165 ortholog_one2one 6 retrogenes
retro_ogar_1573, retro_ogar_2763, retro_ogar_3141, retro_ogar_3205, retro_ogar_727, retro_ogar_851,
Ochotona princeps ENSOPRG00000013805 ortholog_one2one 11 retrogenes
retro_opri_1132, retro_opri_1172, retro_opri_220, retro_opri_309, retro_opri_468, retro_opri_643, retro_opri_681, retro_opri_738, retro_opri_81, retro_opri_887, retro_opri_89,
Procavia capensis ENSPCAG00000014011 ortholog_one2one 1 retrogene
retro_pcap_311,
Pongo abelii ENSPPYG00000019491 ortholog_one2many 2 retrogenes
retro_pabe_1428, retro_pabe_2965,
Pan troglodytes ENSPTRG00000021245 ortholog_one2one 7 retrogenes
retro_ptro_1158, retro_ptro_1703, retro_ptro_1988, retro_ptro_2444, retro_ptro_309, retro_ptro_339, retro_ptro_524,
Rattus norvegicus ENSRNOG00000012081 ortholog_one2one 1 retrogene
retro_rnor_616,
Sarcophilus harrisii ENSSHAG00000006739 ortholog_one2many 1 retrogene
retro_shar_329,
Ictidomys tridecemlineatus ENSSTOG00000020668 possible_ortholog 4 retrogenes
retro_itri_6, retro_itri_714, retro_itri_823, retro_itri_884,
Tupaia belangeri ENSTBEG00000011193 ortholog_one2many 2 retrogenes
retro_tbel_1293, retro_tbel_3405,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_432 92.45 100.00
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2. retro_mmus_3063 53.27 100.00
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Download FASTA sequences of all ENSMUSG00000028367 retrocopies