Parental gene: | Sdccag3, ENSMUSG00000026927 |
| Aliases: | Sdccag3, C330016H24Rik, C630038K21Rik |
| Description: | serologically defined colon cancer antigen 3 [Source:MGI Symbol;Acc:MGI:1915362] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:26382801..26389316(-) |
>ENSMUSG00000026927
ATGTCGGGCTACGCGCGGCGGCAGGGCGCGCCCCCTCTATCGCGGACGCGGAGCCTTGTGGTTCCCGACGCTCCTGCGTT
CTATGAGCGCCGGTCTTGTCTCCCCCAGCTAGACTGTGAGCGCCCCCATGGCGGGGACCTGCACCCCCATCTCTTCGGCT
TTCGGCCGACGTTTATGTGCTATGTGCCCAGCCCGGTGCTGGCTTCGGTAGGAGACACAGGTTTTGGCTATGGAAAGGGG
AAATGTACTAACCAAGGTCCTTCGGGAGCCCCTGAGACGCGCTTTGGAGGTGACAAACTTGAAGACCTTGAAGAAGCCAA
TCCATTCTCCTTCAAAGAGTTTTTGAAAACCAAGAACCTCAGCCTGTCAAAAGAAGACACGACCACCAGCCGAATTTACC
CAAAGGAAGCCTCAAGGCACCCACTGGGACTAGAGCACAGCTCCCCTGCCTCCCAGCTCATGGGATATGGCCTGGAATCT
CAGCAGCCATTTTTTGAAGACCCAACAAGAGCCAGCAACCTAGAGGAGGATGAAGATGATGGATGGAATATAACCTACTT
GCCATCTGCCGTGGATCAGACTCATTCCTCTAGAGACACACAGGACTCACCGCCCTGTGACACCTACCTTTCCTTTTTCT
CCAACTCGTCAGAGCTGGCATGTCCCGAGTCTTTGCCCCCATGGACGCTGAGTGACACCGACTCCAGGATCTCCCCAGCG
TCTCCAGCTGGGAGTCCTAATGCAGACTTTGCAGCTCATGAAGAATCCCTAGGGGACAGACACCTGCGGACGCTGCAGAT
AAGTTATGAAGCACTGAAAGATGAAAACTCTAAGCTCAGAAGAAAGCTAAATGAGGTTCAGAGCTTCTCTGAAACTCAAA
CAGAAATGGTGAGGACACTCGAACGGAAGTTGGAGGCGAAGATGATCAAGGAGGAGAGTGACTTCCATGACCTCGAGTCA
GTAGTCCAGCAAGTCGAACAGAACCTTGAACTGATGACCAAACGGGCTGTAAAAGCAGAAAATCATGTCTTGAAGCTGAA
ACAGGAAATAAATTTGCTTCAGGCCCAGCTCTCAAACTTGAGGCGAGAAAATGAAGCCCTGCGGTCAGGCCAGGGTGCCA
GCCTTTCTGTAGTGAAGCAGAACACCGACGTGGCCTTGCAGAACCTCCACCTTGTCATGAACAGTGCACACGCATCCATA
AAGCAGCTGGTGTCTGGGGCAGACACACTGAACCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAATTAGTGAAGTTAA
AGATGAGGTGGACTCTTGA
ATGTCGGGCTACGCGCGGCGGCAGGGCGCGCCCCCTCTATCGCGGACGCGGAGCCTTGTGGTTCCCGACGCTCCTGCGTT
CTATGAGCGCCGGTCTTGTCTCCCCCAGCTAGACTGTGAGCGCCCCCATGGCGGGGACCTGCACCCCCATCTCTTCGGCT
TTCGGCCGACGTTTATGTGCTATGTGCCCAGCCCGGTGCTGGCTTCGGTAGGAGACACAGGTTTTGGCTATGGAAAGGGG
AAATGTACTAACCAAGGTCCTTCGGGAGCCCCTGAGACGCGCTTTGGAGGTGACAAACTTGAAGACCTTGAAGAAGCCAA
TCCATTCTCCTTCAAAGAGTTTTTGAAAACCAAGAACCTCAGCCTGTCAAAAGAAGACACGACCACCAGCCGAATTTACC
CAAAGGAAGCCTCAAGGCACCCACTGGGACTAGAGCACAGCTCCCCTGCCTCCCAGCTCATGGGATATGGCCTGGAATCT
CAGCAGCCATTTTTTGAAGACCCAACAAGAGCCAGCAACCTAGAGGAGGATGAAGATGATGGATGGAATATAACCTACTT
GCCATCTGCCGTGGATCAGACTCATTCCTCTAGAGACACACAGGACTCACCGCCCTGTGACACCTACCTTTCCTTTTTCT
CCAACTCGTCAGAGCTGGCATGTCCCGAGTCTTTGCCCCCATGGACGCTGAGTGACACCGACTCCAGGATCTCCCCAGCG
TCTCCAGCTGGGAGTCCTAATGCAGACTTTGCAGCTCATGAAGAATCCCTAGGGGACAGACACCTGCGGACGCTGCAGAT
AAGTTATGAAGCACTGAAAGATGAAAACTCTAAGCTCAGAAGAAAGCTAAATGAGGTTCAGAGCTTCTCTGAAACTCAAA
CAGAAATGGTGAGGACACTCGAACGGAAGTTGGAGGCGAAGATGATCAAGGAGGAGAGTGACTTCCATGACCTCGAGTCA
GTAGTCCAGCAAGTCGAACAGAACCTTGAACTGATGACCAAACGGGCTGTAAAAGCAGAAAATCATGTCTTGAAGCTGAA
ACAGGAAATAAATTTGCTTCAGGCCCAGCTCTCAAACTTGAGGCGAGAAAATGAAGCCCTGCGGTCAGGCCAGGGTGCCA
GCCTTTCTGTAGTGAAGCAGAACACCGACGTGGCCTTGCAGAACCTCCACCTTGTCATGAACAGTGCACACGCATCCATA
AAGCAGCTGGTGTCTGGGGCAGACACACTGAACCTTGTTGCTGAAATCCTCAAGTCTATCGACAGAATTAGTGAAGTTAA
AGATGAGGTGGACTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 63 .52 RPM |
| SRP007412_cerebellum | 80 .24 RPM |
| SRP007412_heart | 26 .40 RPM |
| SRP007412_kidney | 42 .23 RPM |
| SRP007412_liver | 21 .14 RPM |
| SRP007412_testis | 161 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000165689 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010905 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008186 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015872 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019772 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000021555 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018876 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_711 | 76.08 | 96.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1545 | 81.00 | 77.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3492 | 82.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000026927 retrocopies