Parental gene:

Ube2e1, ENSMUSG00000021774

Aliases:Ube2e1, UbcM3, Ubce5, ubcM2
Description:ubiquitin-conjugating enzyme E2E 1 [Source:MGI Symbol;Acc:MGI:107411]
Organism:Mouse (Mus musculus)
Coordinates:14:18282721..18331859(-)


>ENSMUSG00000021774
ATGTCGGATGACGATTCGAGGGCCAGCACCAGCTCCTCGTCATCTTCGTCCTCCAACCAGCAGACCGAGAAAGAAGGCAG
CACCCCCAAGAAGAAGGAGAGTAAAGTCAGCATGAGCAAAAATTCGAAGCTTCTCTCCACCAGCGCTAAGAGGATCCAGA
AGGAGCTGGCAGACATCACTTTAGACCCTCCGCCAAACTGCAGTGCTGGTCCCAAGGGTGACAACATCTATGAGTGGAGA
TCAACCATTCTGGGTCCTCCAGGGTCTGTGTATGAAGGTGGAGTATTCTTCCTTGACATTACTTTTACACCAGAGTATCC
TTTCAAGCCTCCAAAGGTTACATTTCGTACAAGAATTTATCACTGTAATATTAATAGCCAAGGAGTTATTTGCTTGGACA
TATTGAAAGACAACTGGAGCCCAGCCCTAACCATCTCGAAAGTCCTCCTTTCTATCTGCTCACTCCTTACAGACTGCAAT
CCTGCTGACCCTTTGGTGGGAAGTATTGCCACTCAGTACATGACCAACAGAGCAGAACACGACAGAATGGCCAGACAGTG
GACCAAGAGATACGCTACATAA

Library Parental gene expression (RPM)
SRP007412_brain 25 .37 RPM
SRP007412_cerebellum 30 .70 RPM
SRP007412_heart 12 .20 RPM
SRP007412_kidney 26 .53 RPM
SRP007412_liver 16 .60 RPM
SRP007412_testis 11 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003515 ortholog_one2one 2 retrogenes
retro_amel_1117, retro_amel_483,
Ciona intestinalis ENSCING00000006860 ortholog_one2many 1 retrogene
retro_cint_33,
Cavia porcellus ENSCPOG00000002251 ortholog_one2many 2 retrogenes
retro_cpor_1036, retro_cpor_52,
Dipodomys ordii ENSDORG00000015441 ortholog_one2one 1 retrogene
retro_dord_785,
Felis catus ENSFCAG00000024719 ortholog_one2one 1 retrogene
retro_fcat_623,
Gorilla gorilla ENSGGOG00000008393 ortholog_one2one 1 retrogene
retro_ggor_76,
Loxodonta africana ENSLAFG00000004150 ortholog_one2one 1 retrogene
retro_lafr_320,
Macropus eugenii ENSMEUG00000014517 ortholog_one2one 1 retrogene
retro_meug_2089,
Mus musculus ENSMUSG00000019927 other_paralog 22 retrogenes
retro_mmus_3405, retro_mmus_3406, retro_mmus_3407, retro_mmus_3409, retro_mmus_3430, retro_mmus_3432, retro_mmus_3434, retro_mmus_3435, retro_mmus_3436, retro_mmus_3563, retro_mmus_3564, retro_mmus_3565, retro_mmus_3566, retro_mmus_3567, retro_mmus_3587, retro_mmus_3589, retro_mmus_3590, retro_mmus_3591, retro_mmus_3592, retro_mmus_3593, retro_mmus_3594, retro_mmus_3595,
Mus musculus ENSMUSG00000027011 within_species_paralog 4 retrogenes
retro_mmus_2814, retro_mmus_3123, retro_mmus_3416, retro_mmus_3571,
Mus musculus ENSMUSG00000038965 other_paralog 10 retrogenes
retro_mmus_1619, retro_mmus_1620, retro_mmus_2147, retro_mmus_2212, retro_mmus_2272, retro_mmus_2315, retro_mmus_3205, retro_mmus_3714, retro_mmus_541, retro_mmus_995,
Mus musculus ENSMUSG00000078578 other_paralog 11 retrogenes
retro_mmus_1818, retro_mmus_1895, retro_mmus_1913, retro_mmus_2293, retro_mmus_2635, retro_mmus_2643, retro_mmus_3119, retro_mmus_3636, retro_mmus_850, retro_mmus_875, retro_mmus_923,
Mus musculus ENSMUSG00000091896 other_paralog 3 retrogenes
retro_mmus_2267, retro_mmus_27, retro_mmus_629,
Oryctolagus cuniculus ENSOCUG00000006026 ortholog_one2one 2 retrogenes
retro_ocun_134, retro_ocun_243,
Otolemur garnettii ENSOGAG00000007527 ortholog_one2one 3 retrogenes
retro_ogar_2029, retro_ogar_2566, retro_ogar_626,
Pan troglodytes ENSPTRG00000014693 ortholog_one2one 1 retrogene
retro_ptro_68,
Pteropus vampyrus ENSPVAG00000001773 ortholog_one2one 1 retrogene
retro_pvam_1451,
Rattus norvegicus ENSRNOG00000008794 ortholog_one2one 3 retrogenes
retro_rnor_1632, retro_rnor_2291, retro_rnor_2343,
Sarcophilus harrisii ENSSHAG00000001416 ortholog_one2one 1 retrogene
retro_shar_712,
Ictidomys tridecemlineatus ENSSTOG00000025799 ortholog_one2one 2 retrogenes
retro_itri_1371, retro_itri_645,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_537 85.42 98.96
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2. retro_mmus_2493 89.88 87.05
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3. retro_mmus_2600 84.34 100.00
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Download FASTA sequences of all ENSMUSG00000021774 retrocopies