Parental gene:

Rhoa, ENSMUSG00000007815

Aliases:Rhoa, Arha, Arha1, Arha2
Description:ras homolog gene family, member A [Source:MGI Symbol;Acc:MGI:1096342]
Organism:Mouse (Mus musculus)
Coordinates:9:108306204..108337939(+)


>ENSMUSG00000007815
ATGGCTGCCATCAGGAAGAAACTGGTGATTGTTGGTGATGGAGCTTGTGGTAAGACATGCTTGCTCATAGTCTTCAGCAA
GGACCAGTTCCCAGAGGTCTATGTGCCCACGGTGTTTGAAAACTATGTGGCGGATATCGAGGTGGATGGGAAGCAGGTAG
AGTTGGCTTTATGGGACACAGCTGGACAGGAAGATTATGACCGCCTGCGGCCTCTCTCTTATCCAGACACCGATGTTATA
TTGATGTGTTTTTCCATTGACAGCCCTGATAGTTTAGAAAACATCCCAGAAAAATGGACTCCAGAAGTCAAGCATTTCTG
TCCAAATGTGCCCATCATCCTGGTTGGGAACAAGAAGGACCTTCGGAATGACGAGCACACGAGACGGGAGTTGGCCAAAA
TGAAGCAGGAGCCGGTAAAACCTGAAGAAGGCAGAGATATGGCAAACAGGATTGGCGCTTTTGGGTACATGGAGTGTTCA
GCAAAGACCAAAGATGGAGTGAGAGAGGTTTTTGAGATGGCCACGAGAGCTGCTCTGCAAGCTAGACGTGGGAAGAAAAA
GTCTGGGTGCCTCATCTTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 70 .67 RPM
SRP007412_cerebellum 75 .81 RPM
SRP007412_heart 107 .96 RPM
SRP007412_kidney 148 .01 RPM
SRP007412_liver 83 .76 RPM
SRP007412_testis 31 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000008297 ortholog_one2one 1 retrogene
retro_acar_41,
Ailuropoda melanoleuca ENSAMEG00000012584 ortholog_one2one 3 retrogenes
retro_amel_101, retro_amel_1515, retro_amel_615,
Anas platyrhynchos ENSAPLG00000014687 ortholog_one2one 1 retrogene
retro_apla_10,
Bos taurus ENSBTAG00000004279 ortholog_one2one 2 retrogenes
retro_btau_206, retro_btau_540,
Canis familiaris ENSCAFG00000023066 ortholog_one2many 2 retrogenes
retro_cfam_1652, retro_cfam_186,
Callithrix jacchus ENSCJAG00000003904 ortholog_one2many 3 retrogenes
retro_cjac_1306, retro_cjac_2010, retro_cjac_411,
Cavia porcellus ENSCPOG00000014073 ortholog_one2one 1 retrogene
retro_cpor_514,
Dasypus novemcinctus ENSDNOG00000012825 ortholog_one2one 6 retrogenes
retro_dnov_1012, retro_dnov_1814, retro_dnov_1904, retro_dnov_2090, retro_dnov_29, retro_dnov_326,
Dipodomys ordii ENSDORG00000003382 ortholog_one2many 3 retrogenes
retro_dord_1, retro_dord_18, retro_dord_538,
Erinaceus europaeus ENSEEUG00000013063 ortholog_one2one 1 retrogene
retro_eeur_147,
Felis catus ENSFCAG00000027456 ortholog_one2one 1 retrogene
retro_fcat_29,
Homo sapiens ENSG00000067560 ortholog_one2one 2 retrogenes
retro_hsap_108, retro_hsap_3632,
Gasterosteus aculeatus ENSGACG00000005670 possible_ortholog 1 retrogene
retro_gacu_9,
Gallus gallus ENSGALG00000003806 ortholog_one2one 1 retrogene
retro_ggal_5,
Gorilla gorilla ENSGGOG00000012843 ortholog_one2one 1 retrogene
retro_ggor_2450,
Gadus morhua ENSGMOG00000008188 possible_ortholog 1 retrogene
retro_gmor_18,
Latimeria chalumnae ENSLACG00000016941 ortholog_one2one 1 retrogene
retro_lcha_15,
Loxodonta africana ENSLAFG00000009726 ortholog_one2one 8 retrogenes
retro_lafr_1196, retro_lafr_1197, retro_lafr_1198, retro_lafr_178, retro_lafr_203, retro_lafr_261, retro_lafr_392, retro_lafr_82,
Meleagris gallopavo ENSMGAG00000002280 ortholog_one2one 1 retrogene
retro_mgal_2,
Myotis lucifugus ENSMLUG00000013911 ortholog_one2many 6 retrogenes
retro_mluc_108, retro_mluc_193, retro_mluc_1976, retro_mluc_2553, retro_mluc_2554, retro_mluc_2555,
Macaca mulatta ENSMMUG00000012962 ortholog_one2many 1 retrogene
retro_mmul_977,
Monodelphis domestica ENSMODG00000012981 ortholog_one2many 2 retrogenes
retro_mdom_19, retro_mdom_294,
Mustela putorius furo ENSMPUG00000013840 ortholog_one2one 5 retrogenes
retro_mputfur_1015, retro_mputfur_140, retro_mputfur_1541, retro_mputfur_1588, retro_mputfur_650,
Mus musculus ENSMUSG00000001313 other_paralog 1 retrogene
retro_mmus_3087,
Nomascus leucogenys ENSNLEG00000006839 ortholog_one2one 4 retrogenes
retro_nleu_104, retro_nleu_2207, retro_nleu_377, retro_nleu_814,
Ornithorhynchus anatinus ENSOANG00000013807 ortholog_one2one 1 retrogene
retro_oana_7,
Oryctolagus cuniculus ENSOCUG00000013323 ortholog_one2one 3 retrogenes
retro_ocun_1075, retro_ocun_726, retro_ocun_854,
Otolemur garnettii ENSOGAG00000028489 ortholog_one2one 1 retrogene
retro_ogar_2340,
Oreochromis niloticus ENSONIG00000018884 possible_ortholog 1 retrogene
retro_onil_32,
Ochotona princeps ENSOPRG00000009638 ortholog_one2one 1 retrogene
retro_opri_590,
Procavia capensis ENSPCAG00000009699 ortholog_one2one 3 retrogenes
retro_pcap_191, retro_pcap_202, retro_pcap_98,
Pelodiscus sinensis ENSPSIG00000015328 ortholog_one2one 1 retrogene
retro_psin_7,
Pan troglodytes ENSPTRG00000014922 ortholog_one2one 3 retrogenes
retro_ptro_10, retro_ptro_2456, retro_ptro_625,
Pteropus vampyrus ENSPVAG00000008738 ortholog_one2one 1 retrogene
retro_pvam_599,
Rattus norvegicus ENSRNOG00000050519 ortholog_one2one 3 retrogenes
retro_rnor_127, retro_rnor_2899, retro_rnor_408,
Sorex araneus ENSSARG00000008509 ortholog_one2one 2 retrogenes
retro_sara_137, retro_sara_325,
Sarcophilus harrisii ENSSHAG00000016308 ortholog_one2many 2 retrogenes
retro_shar_60, retro_shar_96,
Sus scrofa ENSSSCG00000022080 ortholog_one2one 1 retrogene
retro_sscr_72,
Ictidomys tridecemlineatus ENSSTOG00000004561 ortholog_one2many 2 retrogenes
retro_itri_39, retro_itri_96,
Tupaia belangeri ENSTBEG00000002417 ortholog_one2one 1 retrogene
retro_tbel_26,
Takifugu rubripes ENSTRUG00000011944 possible_ortholog 1 retrogene
retro_trub_19,
Tarsius syrichta ENSTSYG00000008220 ortholog_one2many 3 retrogenes
retro_tsyr_1604, retro_tsyr_413, retro_tsyr_593,
Tursiops truncatus ENSTTRG00000017370 ortholog_one2one 2 retrogenes
retro_ttru_27, retro_ttru_339,
Vicugna pacos ENSVPAG00000010931 ortholog_one2one 3 retrogenes
retro_vpac_130, retro_vpac_24, retro_vpac_492,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_178 85.34 98.96
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2. retro_mmus_191 83.85 99.48
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3. retro_mmus_2041 94.00 77.20
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4. retro_mmus_2507 97.93 100.00
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5. retro_mmus_3728 81.01 80.31
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6. retro_mmus_3729 80.68 90.67
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7. retro_mmus_3964 80.79 91.19
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8. retro_mmus_3965 80.79 91.19
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9. retro_mmus_3966 80.79 91.19
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Download FASTA sequences of all ENSMUSG00000007815 retrocopies