RetrogeneDB - Parental gene ENSGALG00000003806 details

							
>ENSGALG00000003806
ATGGCAGCCATTCGAAAAAAGCTGGTCATAGTGGGCGACGGTGCCTGCGGGAAGACCTGTCTGCTGATTGTGTTTAGCAA

AGACCAGTTCCCTGAAGTCTACGTTCCCACCGTCTTTGAAAATTATGTAGCAGATATTGAAGTGGATGGAAAGCAGGTGG

AGTTGGCTTTGTGGGATACAGCAGGACAGGAAGACTACGATCGACTTAGACCGCTTTCTTATCCAGATACTGATGTTATA

CTTATGTGTTTTTCAATTGATAGTCCTGATAGTTTAGAAAACATCCCAGAGAAGTGGACCCCGGAAGTGAAGCATTTCTG

TCCCAACGTGCCTATCATCTTGGTAGGAAACAAGAAGGACCTGAGGAATGACGAGCACACAAGACGAGAGCTGGCCAAAA

TGAAGCAGGAGCCTGTCAAACCTGAGGAAGGAAGAGATATGGCAAACCGCATCGGTGCATTTGGATATATGGAGTGTTCG

GCAAAGACCAAAGACGGTGTGAGGGAGGTTTTTGAAATGGCCACTAGAGCTGCTTTGCAAGCCCGGCGTGGCAAGAAAAA

GTCCGGGTGCCTTCTCTTATAA

Library	Parental gene expression (RPM)
SRP007412_brain	217 .61 RPM
SRP007412_cerebellum	214 .29 RPM
SRP007412_heart	178 .58 RPM
SRP007412_kidney	480 .88 RPM
SRP007412_liver	267 .41 RPM
SRP007412_testis	187 .79 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000008297	ortholog_one2one	1 retrogene	retro_acar_41,
Ailuropoda melanoleuca	ENSAMEG00000012584	ortholog_one2one	3 retrogenes	retro_amel_101, retro_amel_1515, retro_amel_615,
Anas platyrhynchos	ENSAPLG00000014687	ortholog_one2one	1 retrogene	retro_apla_10,
Bos taurus	ENSBTAG00000004279	ortholog_one2one	2 retrogenes	retro_btau_206, retro_btau_540,
Canis familiaris	ENSCAFG00000023066	ortholog_one2many	2 retrogenes	retro_cfam_1652, retro_cfam_186,
Callithrix jacchus	ENSCJAG00000003904	ortholog_one2many	3 retrogenes	retro_cjac_1306, retro_cjac_2010, retro_cjac_411,
Cavia porcellus	ENSCPOG00000014073	ortholog_one2one	1 retrogene	retro_cpor_514,
Dasypus novemcinctus	ENSDNOG00000012825	ortholog_one2one	6 retrogenes	retro_dnov_1012, retro_dnov_1814, retro_dnov_1904, retro_dnov_2090, retro_dnov_29, retro_dnov_326,
Dipodomys ordii	ENSDORG00000003382	ortholog_one2many	3 retrogenes	retro_dord_1, retro_dord_18, retro_dord_538,
Erinaceus europaeus	ENSEEUG00000013063	ortholog_one2one	1 retrogene	retro_eeur_147,
Felis catus	ENSFCAG00000027456	ortholog_one2one	1 retrogene	retro_fcat_29,
Homo sapiens	ENSG00000067560	ortholog_one2one	2 retrogenes	retro_hsap_108, retro_hsap_3632,
Gasterosteus aculeatus	ENSGACG00000005670	possible_ortholog	1 retrogene	retro_gacu_9,
Gorilla gorilla	ENSGGOG00000012843	ortholog_one2one	1 retrogene	retro_ggor_2450,
Gadus morhua	ENSGMOG00000008188	possible_ortholog	1 retrogene	retro_gmor_18,
Latimeria chalumnae	ENSLACG00000016941	ortholog_one2one	1 retrogene	retro_lcha_15,
Loxodonta africana	ENSLAFG00000009726	ortholog_one2one	8 retrogenes	retro_lafr_1196, retro_lafr_1197, retro_lafr_1198, retro_lafr_178, retro_lafr_203, retro_lafr_261, retro_lafr_392, retro_lafr_82,
Meleagris gallopavo	ENSMGAG00000002280	ortholog_one2one	1 retrogene	retro_mgal_2,
Myotis lucifugus	ENSMLUG00000013911	ortholog_one2many	6 retrogenes	retro_mluc_108, retro_mluc_193, retro_mluc_1976, retro_mluc_2553, retro_mluc_2554, retro_mluc_2555,
Macaca mulatta	ENSMMUG00000012962	ortholog_one2many	1 retrogene	retro_mmul_977,
Monodelphis domestica	ENSMODG00000012981	ortholog_one2many	2 retrogenes	retro_mdom_19, retro_mdom_294,
Mustela putorius furo	ENSMPUG00000013840	ortholog_one2one	5 retrogenes	retro_mputfur_1015, retro_mputfur_140, retro_mputfur_1541, retro_mputfur_1588, retro_mputfur_650,
Mus musculus	ENSMUSG00000007815	ortholog_one2one	9 retrogenes	retro_mmus_178, retro_mmus_191, retro_mmus_2041, retro_mmus_2507, retro_mmus_3728, retro_mmus_3729, retro_mmus_3964, retro_mmus_3965, retro_mmus_3966,
Nomascus leucogenys	ENSNLEG00000006839	ortholog_one2one	4 retrogenes	retro_nleu_104, retro_nleu_2207, retro_nleu_377, retro_nleu_814,
Ornithorhynchus anatinus	ENSOANG00000013807	ortholog_one2one	1 retrogene	retro_oana_7,
Oryctolagus cuniculus	ENSOCUG00000013323	ortholog_one2one	3 retrogenes	retro_ocun_1075, retro_ocun_726, retro_ocun_854,
Otolemur garnettii	ENSOGAG00000028489	ortholog_one2one	1 retrogene	retro_ogar_2340,
Oreochromis niloticus	ENSONIG00000018884	possible_ortholog	1 retrogene	retro_onil_32,
Ochotona princeps	ENSOPRG00000009638	ortholog_one2one	1 retrogene	retro_opri_590,
Procavia capensis	ENSPCAG00000009699	ortholog_one2one	3 retrogenes	retro_pcap_191, retro_pcap_202, retro_pcap_98,
Pelodiscus sinensis	ENSPSIG00000015328	ortholog_one2one	1 retrogene	retro_psin_7,
Pan troglodytes	ENSPTRG00000014922	ortholog_one2one	3 retrogenes	retro_ptro_10, retro_ptro_2456, retro_ptro_625,
Pteropus vampyrus	ENSPVAG00000008738	ortholog_one2one	1 retrogene	retro_pvam_599,
Rattus norvegicus	ENSRNOG00000050519	ortholog_one2one	3 retrogenes	retro_rnor_127, retro_rnor_2899, retro_rnor_408,
Sorex araneus	ENSSARG00000008509	ortholog_one2one	2 retrogenes	retro_sara_137, retro_sara_325,
Sarcophilus harrisii	ENSSHAG00000016308	ortholog_one2many	2 retrogenes	retro_shar_60, retro_shar_96,
Sus scrofa	ENSSSCG00000022080	ortholog_one2one	1 retrogene	retro_sscr_72,
Ictidomys tridecemlineatus	ENSSTOG00000004561	ortholog_one2many	2 retrogenes	retro_itri_39, retro_itri_96,
Tupaia belangeri	ENSTBEG00000002417	ortholog_one2one	1 retrogene	retro_tbel_26,
Takifugu rubripes	ENSTRUG00000011944	possible_ortholog	1 retrogene	retro_trub_19,
Tarsius syrichta	ENSTSYG00000008220	ortholog_one2many	3 retrogenes	retro_tsyr_1604, retro_tsyr_413, retro_tsyr_593,
Tursiops truncatus	ENSTTRG00000017370	ortholog_one2one	2 retrogenes	retro_ttru_27, retro_ttru_339,
Vicugna pacos	ENSVPAG00000010931	ortholog_one2one	3 retrogenes	retro_vpac_130, retro_vpac_24, retro_vpac_492,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_ggal_5	86.39	98.96	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSGALG00000003806 retrocopies

Parental gene:	CRHOA, ENSGALG00000003806
Aliases:	None
Description:	transforming protein RhoA [Source:RefSeq peptide;Acc:NP_990035]
Organism:	*Chicken (Gallus gallus)*
Coordinates:	12:2838215..2844480(-)

Parental gene:

CRHOA, ENSGALG00000003806