Parental gene:

Cs, ENSMUSG00000005683

Aliases:Cs, 2610511A05Rik, 9030605P22Rik, BB234005, Cis, ahl4
Description:citrate synthase [Source:MGI Symbol;Acc:MGI:88529]
Organism:Mouse (Mus musculus)
Coordinates:10:128337831..128362479(+)


>ENSMUSG00000005683
ATGGCTCTACTCACTGCAGCAACCCGGCTCTTGGGAGCCAAGAACTCATCCTGCCTCGTCCTTGCTGCCCGGCATGCCAG
TGCTTCTTCCACGAATTTGAAAGATGTACTGAGCAATCTGATACCTAAGGAGCAGGCCAGAATTAAGACCTTCAAGCAGC
AACATGGGAAGACAGTGGTGGGCCAGATCACTGTGGACATGATGTACGGTGGCATGAGAGGCATGAAGGGACTTGTGTAT
GAGACTTCGGTTCTTGATCCTGACGAGGGCATCCGTTTCCGAGGCTACAGTATCCCTGAGTGCCAGAAAATGCTGCCTAA
GGCTAAGGGTGGAGAAGAACCCCTGCCTGAGGGCTTATTTTGGCTGCTGGTAACTGGACAGATGCCCACAGAGGAACAGG
TGTCTTGGCTCTCACGAGAATGGGCAAAAAGGGCAGCTCTGCCTTCTCATGTGGTCACCATGCTGGACAATTTTCCAACC
AATCTGCACCCTATGTCTCAGCTCAGTGCAGCCATCACAGCCCTCAACAGTGAAAGCAACTTCGCCCGGGCATATGCAGA
GGGAATGAACCGAGCTAAGTACTGGGAGCTCATCTATGAGGACTGCATGGACCTCATTGCCAAGCTGCCGTGCGTTGCAG
CCAAGATCTACCGGAATCTGTACCGGGAGGGCAGCAGTATCGGAGCCATTGACTCTAGGCTAGACTGGTCACACAATTTT
ACCAACATGTTAGGCTACACCGACCCTCAGTTCACCGAGCTCATGCGTTTGTACCTCACCATCCATAGTGACCATGAGGG
TGGTAATGTAAGTGCCCACACAAGCCATTTGGTGGGCAGCGCCCTTTCAGACCCTTACCTGTCCTTTGCAGCAGCCATGA
ATGGGCTGGCGGGGCCTCTACATGGACTAGCAAATCAGGAGGTGCTTGTCTGGCTGACACAGCTACAGAAGGAAGTTGGC
AAAGACGTGTCAGATGAGAAGTTACGAGACTACATCTGGAACACACTCAATTCAGGACGGGTGGTCCCAGGATACGGTCA
TGCAGTACTGAGGAAGACTGACCCTCGCTATTCCTGTCAGCGAGAGTTTGCTCTGAAACATCTGCCTAAGGATCCCATGT
TCAAGCTGGTGGCTCAGCTGTACAAGATTGTGCCCAATATCCTCTTAGAGCAAGGGAAGGCTAAGAACCCTTGGCCCAAC
GTAGACGCTCACAGTGGGGTGCTGCTCCAGTACTATGGCATGACGGAGATGAACTACTACACAGTCCTGTTTGGAGTGTC
TCGGGCACTGGGTGTGCTAGCCCAGCTCATCTGGAGCAGAGCCCTAGGCTTCCCCCTGGAAAGGCCCAAGTCCATGAGCA
CGGATGGCCTGATGAAGTTTGTGGACTCTAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 239 .66 RPM
SRP007412_cerebellum 209 .59 RPM
SRP007412_heart 1205 .45 RPM
SRP007412_kidney 434 .64 RPM
SRP007412_liver 98 .69 RPM
SRP007412_testis 60 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004371 ortholog_one2many 1 retrogene
retro_btau_386,
Canis familiaris ENSCAFG00000000115 ortholog_one2many 1 retrogene
retro_cfam_765,
Choloepus hoffmanni ENSCHOG00000000397 ortholog_one2many 1 retrogene
retro_chof_1803,
Callithrix jacchus ENSCJAG00000011275 ortholog_one2many 1 retrogene
retro_cjac_2031,
Dasypus novemcinctus ENSDNOG00000010907 ortholog_one2many 2 retrogenes
retro_dnov_205, retro_dnov_468,
Echinops telfairi ENSETEG00000012035 ortholog_one2many 1 retrogene
retro_etel_584,
Homo sapiens ENSG00000062485 ortholog_one2many 2 retrogenes
retro_hsap_1972, retro_hsap_3621,
Gorilla gorilla ENSGGOG00000009096 ortholog_one2many 2 retrogenes
retro_ggor_1432, retro_ggor_2445,
Macropus eugenii ENSMEUG00000005657 ortholog_one2many 2 retrogenes
retro_meug_1078, retro_meug_1304,
Microcebus murinus ENSMICG00000017659 ortholog_one2many 2 retrogenes
retro_mmur_1322, retro_mmur_394,
Macaca mulatta ENSMMUG00000002483 ortholog_one2many 2 retrogenes
retro_mmul_1502, retro_mmul_1840,
Nomascus leucogenys ENSNLEG00000017514 ortholog_one2many 2 retrogenes
retro_nleu_1201, retro_nleu_809,
Oryctolagus cuniculus ENSOCUG00000007216 ortholog_one2many 1 retrogene
retro_ocun_1183,
Pongo abelii ENSPPYG00000004654 ortholog_one2many 1 retrogene
retro_pabe_2972,
Rattus norvegicus ENSRNOG00000023520 ortholog_one2many 1 retrogene
retro_rnor_2518,
Sorex araneus ENSSARG00000010093 ortholog_many2many 2 retrogenes
retro_sara_360, retro_sara_628,
Sus scrofa ENSSSCG00000021091 ortholog_many2many 1 retrogene
retro_sscr_321,
Sus scrofa ENSSSCG00000022858 ortholog_many2many 1 retrogene
retro_sscr_322,
Tupaia belangeri ENSTBEG00000006425 ortholog_one2many 1 retrogene
retro_tbel_4652,
Tarsius syrichta ENSTSYG00000004483 ortholog_one2many 1 retrogene
retro_tsyr_1659,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_258 91.81 100.00
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Download FASTA sequences of all ENSMUSG00000005683 retrocopies