Parental gene: | MMU.467, ENSMMUG00000002483 |
| Aliases: | None |
| Description: | Citrate synthase [Source:UniProtKB/TrEMBL;Acc:F7HGU4] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 11:53343518..53374573(-) |
>ENSMMUG00000002483
ATGGCTTTACTCACTGCGGCCGCCCGGCTCTTAGGAACCAAGAATGCATCTTGTCTTGTTCTTGCAGCCCGGCATGCCAG
TGCTTCCTCTACGAATTTGAAAGACATATTGGCTGACCTGATACCTAAGGAGCAGGCCAGAATTAAGACCTTCAGGCAGC
AACATGGCAAGACGGTGGTGGGCCAAATCACTGTGGACATGATGTATGGTGGCATGAGAGGCATGAAGGGATTGGTCTAT
GAAACATCCGTTCTTGATCCTGATGAGGGCATCCGTTTCCGAGGCTTTAGTATCCCTGAATGCCAGAAACTGCTACCCAA
GGCTAAGGGTGGGGAAGAACCCCTGCCTGAGGGCTTATTTTGGCTGCTGGTAACTGGACAGATCCCAACAGAGGAACAGG
TATCTTGGCTCTCAAAAGAGTGGGCAAAGAGGGCAGCTCTGCCTTCCCATGTGGTCACCATGCTGGACAACTTTCCCACC
AATCTACACCCCATGTCTCAGCTCAGTGCAGCCGTTACAGCCCTCAACAGTGAAAGTAACTTTGCCCGAGCATATGCAGA
GGGTATCAGCCGAACCAAGTACTGGGAGTTGATTTATGAAGACTCTATGGATTTAATCGCAAAGCTACCTTGTATTGCAG
CAAAGATCTACCGAAATCTCTACAGAGAAGGCAGCGGTATTGGGGCCATTGACTCTAATCTGGACTGGTCCCACAATTTC
ACCAACATGTTAGGCTATACTGATTCTCAGTTCACTGAGCTCATGCGCCTGTACCTCACCATCCACAGTGACCATGAGGG
TGGCAATGTAAGTGCCCATACCAGCCACTTGGTGGGCAGTGCCCTTTCAGACCCTTACCTGTCCTTTGCAGCAGCCATGA
ACGGGCTGGCAGGGCCTCTCCATGGACTGGCAAATCAGGAAGTGCTTGTCTGGCTAACACAGCTGCAGAAGGAAGTTGGC
AAAGATGTGTCAGATGAGAAGTTACGAGACTACATCTGGAACACACTCAACTCGGGACGGGTTGTTCCAGGCTATGGCCA
TGCGGTACTGAGGAAGACTGATCCACGATATACCTGTCAGCGAGAGTTTGCTCTGAAACACCTGCCTAATGACCCCATGT
TTAAGTTGGTTGCTCAGCTATACAAGATTGTGCCCAATGTCCTCTTAGAGCAGGGTAAAGCCAAGAATCCTTGGCCCAAT
GTAGATGCTCACAGTGGGGTGCTGCTCCAGTATTATGGCATGACGGAGATGAATTACTACACGGTCCTGTTTGGGGTGTC
ACGAGCATTGGGTGTACTGGCACAGCTCATCTGGAGCCGAGCCTTAGGCTTCCCTCTAGAAAGGCCCAAGTCCATGAGTA
CAGAGGGTCTGATGAAGTTTGTGGACTCTAAGTCAGGGTAA
ATGGCTTTACTCACTGCGGCCGCCCGGCTCTTAGGAACCAAGAATGCATCTTGTCTTGTTCTTGCAGCCCGGCATGCCAG
TGCTTCCTCTACGAATTTGAAAGACATATTGGCTGACCTGATACCTAAGGAGCAGGCCAGAATTAAGACCTTCAGGCAGC
AACATGGCAAGACGGTGGTGGGCCAAATCACTGTGGACATGATGTATGGTGGCATGAGAGGCATGAAGGGATTGGTCTAT
GAAACATCCGTTCTTGATCCTGATGAGGGCATCCGTTTCCGAGGCTTTAGTATCCCTGAATGCCAGAAACTGCTACCCAA
GGCTAAGGGTGGGGAAGAACCCCTGCCTGAGGGCTTATTTTGGCTGCTGGTAACTGGACAGATCCCAACAGAGGAACAGG
TATCTTGGCTCTCAAAAGAGTGGGCAAAGAGGGCAGCTCTGCCTTCCCATGTGGTCACCATGCTGGACAACTTTCCCACC
AATCTACACCCCATGTCTCAGCTCAGTGCAGCCGTTACAGCCCTCAACAGTGAAAGTAACTTTGCCCGAGCATATGCAGA
GGGTATCAGCCGAACCAAGTACTGGGAGTTGATTTATGAAGACTCTATGGATTTAATCGCAAAGCTACCTTGTATTGCAG
CAAAGATCTACCGAAATCTCTACAGAGAAGGCAGCGGTATTGGGGCCATTGACTCTAATCTGGACTGGTCCCACAATTTC
ACCAACATGTTAGGCTATACTGATTCTCAGTTCACTGAGCTCATGCGCCTGTACCTCACCATCCACAGTGACCATGAGGG
TGGCAATGTAAGTGCCCATACCAGCCACTTGGTGGGCAGTGCCCTTTCAGACCCTTACCTGTCCTTTGCAGCAGCCATGA
ACGGGCTGGCAGGGCCTCTCCATGGACTGGCAAATCAGGAAGTGCTTGTCTGGCTAACACAGCTGCAGAAGGAAGTTGGC
AAAGATGTGTCAGATGAGAAGTTACGAGACTACATCTGGAACACACTCAACTCGGGACGGGTTGTTCCAGGCTATGGCCA
TGCGGTACTGAGGAAGACTGATCCACGATATACCTGTCAGCGAGAGTTTGCTCTGAAACACCTGCCTAATGACCCCATGT
TTAAGTTGGTTGCTCAGCTATACAAGATTGTGCCCAATGTCCTCTTAGAGCAGGGTAAAGCCAAGAATCCTTGGCCCAAT
GTAGATGCTCACAGTGGGGTGCTGCTCCAGTATTATGGCATGACGGAGATGAATTACTACACGGTCCTGTTTGGGGTGTC
ACGAGCATTGGGTGTACTGGCACAGCTCATCTGGAGCCGAGCCTTAGGCTTCCCTCTAGAAAGGCCCAAGTCCATGAGTA
CAGAGGGTCTGATGAAGTTTGTGGACTCTAAGTCAGGGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 155 .33 RPM |
| SRP007412_brain | 176 .93 RPM |
| SRP007412_cerebellum | 180 .42 RPM |
| SRP007412_heart | 361 .91 RPM |
| SRP007412_kidney | 234 .62 RPM |
| SRP007412_liver | 53 .68 RPM |
| SRP007412_testis | 57 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000004371 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000000115 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000397 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011275 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000010907 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000012035 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000062485 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000009096 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000005657 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000017659 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000005683 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017514 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000007216 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004654 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000023520 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000010093 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021091 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022858 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000006425 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004483 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1502 | 77.75 | 73.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1840 | 72.93 | 96.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000002483 retrocopies