Parental gene:

Slbp, ENSMUSG00000004642

Aliases:None
Description:stem-loop binding protein [Source:MGI Symbol;Acc:MGI:108402]
Organism:Mouse (Mus musculus)
Coordinates:5:33634951..33652574(-)


>ENSMUSG00000004642
ATGGCCTGCAGACCTAGAAGCCCACCCGGTTATGGGAGTCGCCGCGACGGTGGTGCGAGCCCGCGGTCCCCTGCGAGATG
GAGTCTCGGACGGAAGCGCAGAGCGGACGGAAGGGACCGGAAGCCCGAGGACTCCGAGGAAGGCGAGCTCCAGACTGCGG
ACCACCGACCTGAAAGCTTTACAACTCCTGAAGGCCATAAGCCCCGTTCTAGATGTTCTGACTGGGCCAGTGCAGTTGAA
GAAGATGAAATGAGGACCAGAGTTAACAAAGAGATTGCAAGGTACAAAAGAAAACTGCTCATAAACGACTTTGGGAGAGA
GAGGAAGTCATCATCGGGAAGTTCTGATTCAAAGGAGTCTATGTCTTCAGTGCCTGCTGATGTGGAGACGGATGAAAGTG
TCTTGATGAGAAGGCAGAAGCAGATCAACTACGGGAAGAACACTATTGCCTATGATCGATATATTAAAGAGGTGCCCAGA
CACCTGCGACAACCTGGAATCCATCCCAGGACCCCCAACAAATTTAAGAAGTACAGCCGGCGGTCATGGGACCAACAAAT
TAAACTCTGGAAGGTGGCTTTGCATTTTTGGGATCCTCCTGCTGAAGAAGGATGTGATTTGCAAGAAATACAACCTGTAG
ATCTTGGGGAAATGGAGACTGAATTCACAGAAAGCAGCTCTGAGTCTCAGACAAGTTCACAGGATAACTTTGATGTGTAT
GCTGGCACACCCACCAAAGTCAGACACGTGGACTGCCAAGTGGAGGATGAGTTTGATTTGGAAGCTTGTTTAACTGAACC
TTTGAAAGACTTCTCTGCCATGAGTTAA

Library Parental gene expression (RPM)
SRP007412_brain 13 .18 RPM
SRP007412_cerebellum 14 .03 RPM
SRP007412_heart 6 .44 RPM
SRP007412_kidney 11 .55 RPM
SRP007412_liver 7 .62 RPM
SRP007412_testis 57 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001328 ortholog_one2one 1 retrogene
retro_btau_1456,
Cavia porcellus ENSCPOG00000000031 ortholog_one2one 1 retrogene
retro_cpor_364,
Otolemur garnettii ENSOGAG00000009750 ortholog_one2one 1 retrogene
retro_ogar_1463,
Pteropus vampyrus ENSPVAG00000002807 ortholog_one2one 2 retrogenes
retro_pvam_490, retro_pvam_941,
Rattus norvegicus ENSRNOG00000037162 ortholog_one2one 2 retrogenes
retro_rnor_1864, retro_rnor_2016,
Tarsius syrichta ENSTSYG00000000376 ortholog_one2one 2 retrogenes
retro_tsyr_1595, retro_tsyr_482,
Tursiops truncatus ENSTTRG00000010901 ortholog_one2many 1 retrogene
retro_ttru_10,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1169 88.04 100.00
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Download FASTA sequences of all ENSMUSG00000004642 retrocopies