Parental gene: | ENSMODG00000019421 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 3:11791791..11799601(+) |
>ENSMODG00000019421
ATGAGGCTGCCCAACATCCTGCTTACGGGTACACCAGGGGTTGGAAAGACCACACTCGGTAAAGAACTTGCATCAAGAAC
AGGACTGAAATACGTCAATGTGGGTGATTTAGCACAAGAAGGACAGTTATATGATGGATTTGATGAAGAATATGTATGTC
CCATTTTGGATGAAGACAGAGTAGTTGATGAGTTAGAAAATAAAATGAAAGAAGGTGGAGTTATCGTTGATTACCATGGC
TGTGACTTCTTCCCCGAACGATGGTTTCATATAGTTTTTGTACTTCAAACAGATAATTCTGTATTATATACAAGACTTGA
AAAGAGGGGATACAGTATAAAGAAACTACAGGACAATGTTCAGTGTGAAATTTTCCAAATTCTTTATGAAGAAGCCATGG
CCTCCTACAAGCCTGAAATAGTACACCGGCTGCCCAGCAATGTACCAGAAGAACTAGAGAGTAATTTAGATCAGATAATT
AAATGGATTGAGGAGTGGATAAAAGATAATAATTGA
ATGAGGCTGCCCAACATCCTGCTTACGGGTACACCAGGGGTTGGAAAGACCACACTCGGTAAAGAACTTGCATCAAGAAC
AGGACTGAAATACGTCAATGTGGGTGATTTAGCACAAGAAGGACAGTTATATGATGGATTTGATGAAGAATATGTATGTC
CCATTTTGGATGAAGACAGAGTAGTTGATGAGTTAGAAAATAAAATGAAAGAAGGTGGAGTTATCGTTGATTACCATGGC
TGTGACTTCTTCCCCGAACGATGGTTTCATATAGTTTTTGTACTTCAAACAGATAATTCTGTATTATATACAAGACTTGA
AAAGAGGGGATACAGTATAAAGAAACTACAGGACAATGTTCAGTGTGAAATTTTCCAAATTCTTTATGAAGAAGCCATGG
CCTCCTACAAGCCTGAAATAGTACACCGGCTGCCCAGCAATGTACCAGAAGAACTAGAGAGTAATTTAGATCAGATAATT
AAATGGATTGAGGAGTGGATAAAAGATAATAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012471 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000036421 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000024524 | ortholog_one2many | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015545 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016022 | ortholog_one2many | 12 retrogenes | |
| Myotis lucifugus | ENSMLUG00000028932 | ortholog_one2many | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014588 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000078941 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004086 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000020970 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000027736 | ortholog_one2many | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000015527 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000016949 | ortholog_one2many | 10 retrogenes | |
| Rattus norvegicus | ENSRNOG00000039848 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000017216 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000024448 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_55 | 92.98 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_409 | 87.95 | 96.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_459 | 87.59 | 83.63 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_519 | 91.28 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_666 | 89.02 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mdom_845 | 84.80 | 73.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mdom_913 | 76.72 | 67.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mdom_1016 | 73.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mdom_1136 | 96.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mdom_1204 | 99.42 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mdom_1430 | 93.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_mdom_1826 | 96.95 | 76.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_mdom_1827 | 98.84 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_mdom_2023 | 96.15 | 76.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000019421 retrocopies