Parental gene:

ENSMODG00000019297

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:2:506646886..506650456(+)


>ENSMODG00000019297
ATGGCGCCGAAGCCCAAGAAGGAAGCGGTTGTCCCCCCCAAGACAGAGGCCAAGGCCTTGAAAGCCAAGAAGGCAGTGTT
GAAGGGTGTCCATAGCCACAAAAAGAAGAAGATCCGAACGTCTCCTACCTTCAGGCGACCCAAGACGCTGAGACTTCGAA
GGCAGCCCAAATACCCTCGGAAAAGTGCTCCTCGGAGAAACAAGCTTGATCACTATGCCATCATTAAGTTTCCCTTGACC
ACTGAGTCTGCTATGAAGAAGATTGAGGACAACAACACTCTTGTCTTCATTGTGGACGTCAAGGCCAATAAGCATCAGAT
CAAGCAGGCAGTAAAGAAGCTCTATGACATTGATGTGGCCAAGGTCAACACACTGATCCGGCCTGACGGAGAGAAGAAGG
CCTATGTCCGACTTGCTCCTGACTATGACGCATTGGACGTTGCCAACAAAGTGAGTATATGG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000005311 possible_ortholog 2 retrogenes
Ailuropoda melanoleuca ENSAMEG00000004684 possible_ortholog 31 retrogenes
Bos taurus ENSBTAG00000046394 possible_ortholog 6 retrogenes
Callithrix jacchus ENSCJAG00000013126 possible_ortholog 7 retrogenes
Cavia porcellus ENSCPOG00000001452 possible_ortholog 6 retrogenes
Dasypus novemcinctus ENSDNOG00000019487 possible_ortholog 65 retrogenes
Dipodomys ordii ENSDORG00000000974 possible_ortholog 10 retrogenes
Equus caballus ENSECAG00000008928 possible_ortholog 1 retrogene
Felis catus ENSFCAG00000004021 possible_ortholog 35 retrogenes
Homo sapiens ENSG00000198242 possible_ortholog 57 retrogenes
Gorilla gorilla ENSGGOG00000016736 possible_ortholog 26 retrogenes
Loxodonta africana ENSLAFG00000013387 possible_ortholog 16 retrogenes
Myotis lucifugus ENSMLUG00000012448 possible_ortholog 4 retrogenes
Mustela putorius furo ENSMPUG00000014179 possible_ortholog 12 retrogenes
Mus musculus ENSMUSG00000058546 possible_ortholog 8 retrogenes
Nomascus leucogenys ENSNLEG00000002872 possible_ortholog 60 retrogenes
Ochotona princeps ENSOPRG00000012620 possible_ortholog 49 retrogenes
Procavia capensis ENSPCAG00000017002 possible_ortholog 30 retrogenes
Pongo abelii ENSPPYG00000008108 possible_ortholog 49 retrogenes
Pteropus vampyrus ENSPVAG00000002922 possible_ortholog 32 retrogenes
Rattus norvegicus ENSRNOG00000023344 possible_ortholog 6 retrogenes
Sarcophilus harrisii ENSSHAG00000014549 possible_ortholog 13 retrogenes
Sus scrofa ENSSSCG00000017768 possible_ortholog 9 retrogenes
Sus scrofa ENSSSCG00000029802 possible_ortholog 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000011328 possible_ortholog 23 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_120 94.84 99.35
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2. retro_mdom_870 53.02 96.10
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3. retro_mdom_912 54.17 61.69
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Download FASTA sequences of all ENSMODG00000019297 retrocopies