Parental gene: | MMU.18006, ENSMMUG00000023051 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 12:33433538..33447616(+) |
>ENSMMUG00000023051
ATGGCTGAAAATGGTGATAATGAAAAGATGGCTGCCCTGGAGGCCAAAATCTGTCATCAAATTGAGTATTATTTTGGCGA
CTTCAATTTGCCACGGGACAAGTTTCTAAAGGAACAGATAAAACTGGATGAAGGCTGGGTACCTTTGGAGATAATGATAA
AATTCAACAGGTTGAACCGTCTAACAACAGACTTTAATGTAATTGTGGAAGCATTGAGCAAATCCAAGGCAGAACTCATG
GAAATCAGTGAAGATAAAACTAAAATCAGAAGGTCTCCAAGCAAACCCCTACCTGAAGTGACTGATGAGTATAAAAATGA
TGTAAAAAACAGATCTGTTTATATTAAAGGCTTCCCAACTGATGCAACTCTTGATGACATAAAAGAATGGTTAGAAGATA
AAGGTCAAGTACTAAATATTCAGATGAGAAGAACATTGCATAAAGCATTTAAGGGATCAATTTTTGTTGTGTTTGATAGC
ATTGAATCTGCTAAGAAGTTTGTAGAGACCCCTGACCAGAAGTACAAAGAAACAGACCTGCTAATACTTTTCAAGGATGA
TTACTTTGCCAAAAAAAATGAAGAAAGAAAACAAAACAAAGTGGAAGCTAAATTAAGAGCTAAACAAGAGCAAGAAGCAA
AACAAAAGTTAGAAGAAGATGCTGAAATGAAATCTCTAGAAGAAAAGATTGGATGCTTGCTGAAATTTTCAGGTGATTTA
GATGATCAGACCTGTAGAGAAGATTTACACATACTTTTCTCAAATCATGGTGAAATAAAATGGATAGACTTCGTCAGAGG
AGCAAAAGAGGGGATAATTCTATTTAAAGAAAAAGCCAAGGAAGCTTTGGGTAAAGCCAAAGATGCAAATAATGGTAACC
TACAATTAAGGAACAAAGAAGTGACTTGGGAAGTACTAGAAGGAGAGGTGGAAAAAGAACTGAAAAAAATAATAGAAGAC
CAACAAGAATCCCTAAACAAATGGAAGTCAAAAGGAAAAGTACAGTTTCAGGGCAAGAAAACGAAATTTGCTAGTGATGA
TGAACATGATGAAAATGGTGCAACTGGACCTGTGAAAAGAGCAAGAGAAGAAACAGACAAAGAAGAACCTGCATCCAAAC
AACAGAAAACAGAAAATGGTGCTGGAGACCAGTAG
ATGGCTGAAAATGGTGATAATGAAAAGATGGCTGCCCTGGAGGCCAAAATCTGTCATCAAATTGAGTATTATTTTGGCGA
CTTCAATTTGCCACGGGACAAGTTTCTAAAGGAACAGATAAAACTGGATGAAGGCTGGGTACCTTTGGAGATAATGATAA
AATTCAACAGGTTGAACCGTCTAACAACAGACTTTAATGTAATTGTGGAAGCATTGAGCAAATCCAAGGCAGAACTCATG
GAAATCAGTGAAGATAAAACTAAAATCAGAAGGTCTCCAAGCAAACCCCTACCTGAAGTGACTGATGAGTATAAAAATGA
TGTAAAAAACAGATCTGTTTATATTAAAGGCTTCCCAACTGATGCAACTCTTGATGACATAAAAGAATGGTTAGAAGATA
AAGGTCAAGTACTAAATATTCAGATGAGAAGAACATTGCATAAAGCATTTAAGGGATCAATTTTTGTTGTGTTTGATAGC
ATTGAATCTGCTAAGAAGTTTGTAGAGACCCCTGACCAGAAGTACAAAGAAACAGACCTGCTAATACTTTTCAAGGATGA
TTACTTTGCCAAAAAAAATGAAGAAAGAAAACAAAACAAAGTGGAAGCTAAATTAAGAGCTAAACAAGAGCAAGAAGCAA
AACAAAAGTTAGAAGAAGATGCTGAAATGAAATCTCTAGAAGAAAAGATTGGATGCTTGCTGAAATTTTCAGGTGATTTA
GATGATCAGACCTGTAGAGAAGATTTACACATACTTTTCTCAAATCATGGTGAAATAAAATGGATAGACTTCGTCAGAGG
AGCAAAAGAGGGGATAATTCTATTTAAAGAAAAAGCCAAGGAAGCTTTGGGTAAAGCCAAAGATGCAAATAATGGTAACC
TACAATTAAGGAACAAAGAAGTGACTTGGGAAGTACTAGAAGGAGAGGTGGAAAAAGAACTGAAAAAAATAATAGAAGAC
CAACAAGAATCCCTAAACAAATGGAAGTCAAAAGGAAAAGTACAGTTTCAGGGCAAGAAAACGAAATTTGCTAGTGATGA
TGAACATGATGAAAATGGTGCAACTGGACCTGTGAAAAGAGCAAGAGAAGAAACAGACAAAGAAGAACCTGCATCCAAAC
AACAGAAAACAGAAAATGGTGCTGGAGACCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 22 .45 RPM |
| SRP007412_brain | 51 .88 RPM |
| SRP007412_cerebellum | 49 .79 RPM |
| SRP007412_heart | 32 .68 RPM |
| SRP007412_kidney | 37 .09 RPM |
| SRP007412_liver | 9 .46 RPM |
| SRP007412_testis | 33 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007763 | ortholog_one2one | 5 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013450 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000004614 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000138385 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000023471 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000000867 | ortholog_one2many | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000001650 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016316 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008227 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004958 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029768 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012919 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000012620 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000007998 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009056 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002152 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_529 | 83.41 | 55.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1153 | 78.85 | 61.43 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000023051 retrocopies