Parental gene: | SSB, ENSGGOG00000023471 |
| Aliases: | None |
| Description: | Sjogren syndrome antigen B (autoantigen La) [Source:HGNC Symbol;Acc:11316] |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 2b:57615972..57627918(+) |
>ENSGGOG00000023471
GTGTTCTTTAGGGACGATTACTTTGCCAAAAAAAATGAAGAAAGAAAACAAAATAAAGTGGAAGCTAAATTAAGAGCTAA
ACAGGAGCAAGAAGCAAAACAAAAGTTAGAAGAAGATGCTGAAATGAAATCTCTAGAAGAAAAGATTGGATGCTTGCTGA
AATTTTCGGGTGATTTAGATGATCAGACCTGTAGAGAAGATTTACACATACTTTTCTCAAATCATGGTGAAATAAAATGG
ATAGACTTCGTCAGAGGAGCAAAAGAGGGGATAATTCTATTTAAGGAAAAGCCAAGGAAGCACTTGGGAAAAGCCAAAGA
TGCAAATAATNGTAACCTACAATTAAGGAACAAAGAAGTGACTTGGGAAGTACTAGAAGGAGAGGTGGAAAAAGAAGCAC
TGAAAAAAATAATAGAAGACCAACAAGAATCCCTAAACAAATGGAAGTCAAAAGGTCGTAGATTTAAAGGAAAAGGAAAG
GGTAATAAAGCTGCCCAGCCTGGGTCTGGTAAAGGAAAAGTACAGTTTCAGGGCAAGAAAACGAAATTTGCTAGTGATGA
TGAACATGATGAACATGATGAAAATGGTGCAACTGGACCTGTGAAAAGAGCAAGAGAAGAAACAGACAAAGAAGAACCTG
CATCCAAACAACAGAAAACAGAAAATGGTGCTGGAGACCAGTAG
GTGTTCTTTAGGGACGATTACTTTGCCAAAAAAAATGAAGAAAGAAAACAAAATAAAGTGGAAGCTAAATTAAGAGCTAA
ACAGGAGCAAGAAGCAAAACAAAAGTTAGAAGAAGATGCTGAAATGAAATCTCTAGAAGAAAAGATTGGATGCTTGCTGA
AATTTTCGGGTGATTTAGATGATCAGACCTGTAGAGAAGATTTACACATACTTTTCTCAAATCATGGTGAAATAAAATGG
ATAGACTTCGTCAGAGGAGCAAAAGAGGGGATAATTCTATTTAAGGAAAAGCCAAGGAAGCACTTGGGAAAAGCCAAAGA
TGCAAATAATNGTAACCTACAATTAAGGAACAAAGAAGTGACTTGGGAAGTACTAGAAGGAGAGGTGGAAAAAGAAGCAC
TGAAAAAAATAATAGAAGACCAACAAGAATCCCTAAACAAATGGAAGTCAAAAGGTCGTAGATTTAAAGGAAAAGGAAAG
GGTAATAAAGCTGCCCAGCCTGGGTCTGGTAAAGGAAAAGTACAGTTTCAGGGCAAGAAAACGAAATTTGCTAGTGATGA
TGAACATGATGAACATGATGAAAATGGTGCAACTGGACCTGTGAAAAGAGCAAGAGAAGAAACAGACAAAGAAGAACCTG
CATCCAAACAACAGAAAACAGAAAATGGTGCTGGAGACCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 10 .98 RPM |
| SRP007412_cerebellum | 7 .84 RPM |
| SRP007412_heart | 2 .69 RPM |
| SRP007412_kidney | 13 .66 RPM |
| SRP007412_liver | 5 .91 RPM |
| SRP007412_testis | 11 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007763 | ortholog_one2many | 5 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013450 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000004614 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000138385 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011507 | within_species_paralog | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000000867 | ortholog_many2many | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000001650 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016316 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000023051 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000008227 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004958 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029768 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012919 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000012620 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000007998 | ortholog_many2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000009056 | ortholog_one2many | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000002152 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_433 | 85.71 | 95.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_792 | 76.64 | 58.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2834 | 70.59 | 51.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2915 | 88.04 | 81.06 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000023471 retrocopies