Parental gene:

MMU.14275, ENSMMUG00000020214

Aliases:None
Description:survival of motor neuron 1, telomeric [Source:RefSeq peptide;Acc:NP_001247593]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:67549243..67580251(-)


>ENSMMUG00000020214
ATGGCGATGAGCAGCGGCGGCAGTGGTGGCGGCGTCCCGGAGCAGGAGGATTCCGTGCTGTTCCGGCGCGGCACAGGCCA
GAGTGATGATTCTGACATTTGGGATGATACAGCATTGATAAAAGCATATGATAAAGCTGTGGCTTCATTTAAGCATGCTC
TGAAGAATGGTGACATTTGTGAAACTTCAGGTAAACCAAAAACCACACCTAAAAGAAAACCTGCTAAGAAGAATAAAAGC
CAAAAGAAGAATACTGCAGCTCCCTTAAAACAGTGGAAAGTTGGGGACAAATGTTCTGCCATTTGGTCAGAAGACGGTTG
CATTTACCCAGCTACCATTGCTTCGGTTGATTTTAAGAGAGAAACCTGTGTTGTGGTTTACACTGGATATGGAAATAGAG
AGGAGCAAAATCTGTCCGATCTACTTTCCCCAATCTCTGAAGTAGCTAATAATATAGAACAGAATGCTCAAGAGAATGAA
AATGAAAGCCAAGTTTCAACAGATGAAAGTGAGAACTCCAGGTCTCCTGGAAGTAAATCAGATAATATCAAGTCCAAATC
TGCTCCATGGAACTCTTTTCTCCCTCCACCACCCCCCATGCCAGGGCCAAGACTTGGACCAGGAAAGCCAGGTCTAAAAT
TCAATGGCCCACCACCGCCGCCGCCACCACCACCACCCCACTTACTATCATGCTGGATGCCTCCATTTCCTTCTGGACCA
CCAATAATTCCCCCACCACCTCCCATATGTCCAGATTCTCTTGATGATGCTGATGCTTTGGGAAGTATGTTAATTTCATG
GTACATGAGTGGCTATCACACTGGCTATTATATGGGTTTCAGACAAAATCAGAAAGAAGGAAGGTGCTCACATTCCTTAA
ATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .60 RPM
SRP007412_brain 5 .94 RPM
SRP007412_cerebellum 5 .94 RPM
SRP007412_heart 3 .24 RPM
SRP007412_kidney 4 .46 RPM
SRP007412_liver 1 .46 RPM
SRP007412_testis 11 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000012328 ortholog_one2many 1 retrogene
retro_cpor_988,
Dasypus novemcinctus ENSDNOG00000007283 ortholog_one2many 4 retrogenes
retro_dnov_1239, retro_dnov_1613, retro_dnov_1637, retro_dnov_2175,
Echinops telfairi ENSETEG00000001406 ortholog_one2many 2 retrogenes
retro_etel_1549, retro_etel_2012,
Homo sapiens ENSG00000205571 ortholog_many2many 1 retrogene
retro_hsap_4140,
Gorilla gorilla ENSGGOG00000026704 ortholog_many2many 1 retrogene
retro_ggor_2780,
Myotis lucifugus ENSMLUG00000010603 ortholog_one2many 1 retrogene
retro_mluc_1623,
Nomascus leucogenys ENSNLEG00000004454 ortholog_one2many 1 retrogene
retro_nleu_1054,
Oryctolagus cuniculus ENSOCUG00000017097 ortholog_many2many 1 retrogene
retro_ocun_617,
Pan troglodytes ENSPTRG00000016955 ortholog_one2many 1 retrogene
retro_ptro_2813,
Sus scrofa ENSSSCG00000016970 ortholog_many2many 1 retrogene
retro_sscr_654,
Ictidomys tridecemlineatus ENSSTOG00000012288 ortholog_one2many 1 retrogene
retro_itri_968,
Tupaia belangeri ENSTBEG00000002399 ortholog_one2many 1 retrogene
retro_tbel_1033,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_216 93.54 100.00
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Download FASTA sequences of all ENSMMUG00000020214 retrocopies