Parental gene: | MMU.2446, ENSMMUG00000016898 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 7:26659880..26670774(+) |
>ENSMMUG00000016898
ATGACTCTCCTCTGCCCTCGCCCCGCGCTCTGCTACCATTTCCTTACGTCTCTGCTTCGCTCAGCGATGCAAAACGCGCG
AGGCGCACGGCAGAGGGCCGAGGCCGCGGGACTCTCCGGGCCAGGCCCGCCCCTCGGCCGCGCAGCGCAGCACGGGACGC
CCTGGCGGCTGTCCAGCGCTGGCAGTCTGAGCCGAGGCTGTCGCGGAGCCAGTACAGCCGGGGCCGCGGGCTGGAAGGGC
GAGCTTCCTAAGCCGGGGGGATGCCCGGCGCCCGGGCAGGAGACACCCGCCATTTCACCCAGTAAGCGGCCCCGGCCTGC
AGAGGAGGGCGGCATGCAGCTCCGCTTTGCCCGGCTCTCCGATCACGCCACGGCCCCCACCCGGGGCTCCGCGCGGGCCG
CGGGCTACGACCTGTACAGTGCCTATGATTACACAATACCACCTATGGAGAAAGCTCTTGTGAAAACGGACATTCAGATA
GCTCTCCCTTCTGGGTGTTATGGAAGAGTAGCTCCACGGTCAGGCTTGGCTGCAAAATACTTTATTGATGTAGGAGCTGG
TGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAAGTTTGAAGTCAAAAAGG
GTGATCGAATTGCACAGCTCATTTGCGAACGGATTTTTTATCCAGAAATAGAAGAAGTTCAAGCTTTGGATGACACCGAA
AGGGGTTCAGGCGGTTTTGGTTCCACTGGAAAGAATTAA
ATGACTCTCCTCTGCCCTCGCCCCGCGCTCTGCTACCATTTCCTTACGTCTCTGCTTCGCTCAGCGATGCAAAACGCGCG
AGGCGCACGGCAGAGGGCCGAGGCCGCGGGACTCTCCGGGCCAGGCCCGCCCCTCGGCCGCGCAGCGCAGCACGGGACGC
CCTGGCGGCTGTCCAGCGCTGGCAGTCTGAGCCGAGGCTGTCGCGGAGCCAGTACAGCCGGGGCCGCGGGCTGGAAGGGC
GAGCTTCCTAAGCCGGGGGGATGCCCGGCGCCCGGGCAGGAGACACCCGCCATTTCACCCAGTAAGCGGCCCCGGCCTGC
AGAGGAGGGCGGCATGCAGCTCCGCTTTGCCCGGCTCTCCGATCACGCCACGGCCCCCACCCGGGGCTCCGCGCGGGCCG
CGGGCTACGACCTGTACAGTGCCTATGATTACACAATACCACCTATGGAGAAAGCTCTTGTGAAAACGGACATTCAGATA
GCTCTCCCTTCTGGGTGTTATGGAAGAGTAGCTCCACGGTCAGGCTTGGCTGCAAAATACTTTATTGATGTAGGAGCTGG
TGTCATAGATGAAGATTATAGAGGAAATGTTGGTGTTGTACTGTTTAATTTTGGCAAAGAAAAGTTTGAAGTCAAAAAGG
GTGATCGAATTGCACAGCTCATTTGCGAACGGATTTTTTATCCAGAAATAGAAGAAGTTCAAGCTTTGGATGACACCGAA
AGGGGTTCAGGCGGTTTTGGTTCCACTGGAAAGAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 19 .91 RPM |
| SRP007412_brain | 14 .68 RPM |
| SRP007412_cerebellum | 12 .72 RPM |
| SRP007412_heart | 16 .31 RPM |
| SRP007412_kidney | 10 .09 RPM |
| SRP007412_liver | 9 .82 RPM |
| SRP007412_testis | 19 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001873 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000011998 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001813 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000024791 | ortholog_one2one | 8 retrogenes | |
| Dipodomys ordii | ENSDORG00000010560 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000015971 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000015350 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000128951 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005658 | ortholog_one2one | 5 retrogenes | |
| Macropus eugenii | ENSMEUG00000006318 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006842 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000002687 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005996 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003862 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000028847 | ortholog_one2one | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000006454 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007044 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000007221 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000026096 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000007811 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012669 | ortholog_one2one | 9 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015422 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000004723 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_449 | 62.94 | 66.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_707 | 80.90 | 68.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_720 | 90.70 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_910 | 77.50 | 62.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_1429 | 70.62 | 63.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmul_2645 | 62.58 | 63.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000016898 retrocopies