Parental gene: | EIF2S3, ENSMMUG00000006979 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | X:21869009..21893011(+) |
>ENSMMUG00000006979
ATGGCGGGCGGAGAAGCTGGAGTGACTCTGGGGCAGCCGCATCTTTCGCGTCAGGATCTCACCACGTTGGATGTTACCAA
GTTGACGCCACTTTCACACGAAGTTATCAGCAGGCAAGCCACAATTAATATAGGTACAATTGGTCATGTAGCTCATGGGA
AATCCACAGTTGTCAAAGCTATTTCTGGAGTTCACACCGTCAGGTTCAAAAATGAACTAGAAAGAAATATTACAATCAAG
CTTGGATATGCTAATGCTAAGATTTATAAACTTGATGACCCAAGTTGCCCTCGGCCAGAATGTTATAGATCTTGTGGGAG
CAGTACACCTGATGAGTTTCCTACAGACATTGCAGGGACCAAAGGGAACTTCAAATTAGTCAGACATGTTTCCTTTGTTG
ACTGTCCTGGCCATGATATTTTGATGGCTACTATGCTGAATGGTGCAGCAGTGATGGATGCAGCTCTTCTGTTGATAGCT
GGTAATGAATCTTGTCCTCAGCCTCAGACGTCTGAACACCTGGCTGCTATAGAGATCATGAAACTGAAGCATATTTTGAT
TCTACAAAATAAAATTGATTTGGTAAAAGAAAGTCAGGCTAAAGAACAATACGAGCAGATCCTTGCATTTGTCCAAGGTA
CAGTAGCAGAGGGAGCTCCCATTATTCCAATTTCAGCTCAGCTGAAATACAATATTGAAGTTGTTTGTGAGTACATAGTA
AAGAAAATTCCAGTACCCCCAAGAGACTTTACTTCAGAGCCCCGGCTTATTGTTATTAGATCTTTTGATGTCAACAAACC
TGGCTGTGAAGTTGATGACCTTAAGGGAGGTGTAGCTGGTGGTAGTATCCTAAAAGGAGTATTAAAGGTGGGCCAGGAGA
TAGAAGTAAGACCTGGTATTGTTTCCAAAGATAGTGAAGGAAAACTCATGTGTAAACCAATCTTTTCCAAAATTGTATCA
CTTTTTGCAGAGCATAATGATCTGCAATATGCTGCTCCAGGCGGTCTTATTGGAGTTGGAACAAAAATTGACCCCACTTT
GTGCCGGGCTGACAGAATGGTGGGACAAGTACTTGGTGCAGTCGGAGCTTTACCTGAGATATTCACAGAATTGGAAATTT
CCTATTTCCTGCTTAGACGGCTTCTAGGTGTACGCACTGAAGGAGACAAGAAAGCAGCAAAGGTTCAAAAGCTGTCTAAG
AATGAAGTGCTCATGGTGAACATAGGATCCCTGTCGACAGGAGGGAGAGTTAGTGCTGTCAAGGCCGATTTGGGTAAAAT
TGTTTTGACCAATCCAGTGTGCACAGAGGTAGGAGAAAAAATTGCCCTTAGCCGAAGAGTTGAAAAACACTGGCGTTTAA
TTGGTTGGGGTCAGATAAGAAGAGGAGTGACAATCAAGCCAACAGTAGATGATGACTGA
ATGGCGGGCGGAGAAGCTGGAGTGACTCTGGGGCAGCCGCATCTTTCGCGTCAGGATCTCACCACGTTGGATGTTACCAA
GTTGACGCCACTTTCACACGAAGTTATCAGCAGGCAAGCCACAATTAATATAGGTACAATTGGTCATGTAGCTCATGGGA
AATCCACAGTTGTCAAAGCTATTTCTGGAGTTCACACCGTCAGGTTCAAAAATGAACTAGAAAGAAATATTACAATCAAG
CTTGGATATGCTAATGCTAAGATTTATAAACTTGATGACCCAAGTTGCCCTCGGCCAGAATGTTATAGATCTTGTGGGAG
CAGTACACCTGATGAGTTTCCTACAGACATTGCAGGGACCAAAGGGAACTTCAAATTAGTCAGACATGTTTCCTTTGTTG
ACTGTCCTGGCCATGATATTTTGATGGCTACTATGCTGAATGGTGCAGCAGTGATGGATGCAGCTCTTCTGTTGATAGCT
GGTAATGAATCTTGTCCTCAGCCTCAGACGTCTGAACACCTGGCTGCTATAGAGATCATGAAACTGAAGCATATTTTGAT
TCTACAAAATAAAATTGATTTGGTAAAAGAAAGTCAGGCTAAAGAACAATACGAGCAGATCCTTGCATTTGTCCAAGGTA
CAGTAGCAGAGGGAGCTCCCATTATTCCAATTTCAGCTCAGCTGAAATACAATATTGAAGTTGTTTGTGAGTACATAGTA
AAGAAAATTCCAGTACCCCCAAGAGACTTTACTTCAGAGCCCCGGCTTATTGTTATTAGATCTTTTGATGTCAACAAACC
TGGCTGTGAAGTTGATGACCTTAAGGGAGGTGTAGCTGGTGGTAGTATCCTAAAAGGAGTATTAAAGGTGGGCCAGGAGA
TAGAAGTAAGACCTGGTATTGTTTCCAAAGATAGTGAAGGAAAACTCATGTGTAAACCAATCTTTTCCAAAATTGTATCA
CTTTTTGCAGAGCATAATGATCTGCAATATGCTGCTCCAGGCGGTCTTATTGGAGTTGGAACAAAAATTGACCCCACTTT
GTGCCGGGCTGACAGAATGGTGGGACAAGTACTTGGTGCAGTCGGAGCTTTACCTGAGATATTCACAGAATTGGAAATTT
CCTATTTCCTGCTTAGACGGCTTCTAGGTGTACGCACTGAAGGAGACAAGAAAGCAGCAAAGGTTCAAAAGCTGTCTAAG
AATGAAGTGCTCATGGTGAACATAGGATCCCTGTCGACAGGAGGGAGAGTTAGTGCTGTCAAGGCCGATTTGGGTAAAAT
TGTTTTGACCAATCCAGTGTGCACAGAGGTAGGAGAAAAAATTGCCCTTAGCCGAAGAGTTGAAAAACACTGGCGTTTAA
TTGGTTGGGGTCAGATAAGAAGAGGAGTGACAATCAAGCCAACAGTAGATGATGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 29 .19 RPM |
| SRP007412_brain | 21 .18 RPM |
| SRP007412_cerebellum | 25 .77 RPM |
| SRP007412_heart | 28 .32 RPM |
| SRP007412_kidney | 19 .25 RPM |
| SRP007412_liver | 9 .94 RPM |
| SRP007412_testis | 3 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014337 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000018584 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000017343 | ortholog_many2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000341 | ortholog_one2many | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000011052 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007541 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000035150 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020194 | ortholog_many2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002533 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012178 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007144 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012474 | ortholog_one2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_473 | 93.88 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_713 | 96.43 | 71.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_1965 | 99.15 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_2258 | 96.03 | 58.69 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000006979 retrocopies