Parental gene: | ENSETEG00000000341 |
| Aliases: | None |
| Description: | None |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_3414:40504..90872(+) |
>ENSETEG00000000341
ATGGCGGGGAATGAGGCTGGAGTCACTCTGGGGCAGCTTCATCTTTCTCGGCAGGATCTCACCACCTTGGATGTTACCAA
ATTGACACCACTGTCCCATGAAGTCATCAGCAGACAAGCCACCATCAATATAGGCACAATTGGTCATGTGGCTCATGGGA
AGTCTACAGTTGTAAAAGCTATTTCTGGCGTCCACACTGTCAGGTTCAAAAATGAACTAGAAAGAAATATTACCATCAAA
CTTGGATATGCTAATGCTAAGATTTATAAACTTGATGACCCAAGTCGCCCTCGACCAGAATGTTATCGATCCTGTGGAAG
CAGTACACCAGATGAGTTTCCGACAGACATTCCAGGGACCAAAGGGAACTTCAAATTAGTCAGGCACGTTTCCTTCGTGG
ACTGTCCAGGCCATGATATTCTGATGGCTACCATGCTGAACGGGGCCGCAGTGATGGATGCAGCTCTTCTGCTGATAGCT
GGTAATGAATCGTGTCCCCAGCCACAGACATCTGAACATCTGGCTGCTATAGAAATCATGAAATTGAAACATATTTTGAT
TCTACAAAATAAAATCGATTTGGTGAAAGAAAGTCAGGCTAAAGAACAGTATGAACAAATTCTTGCGTTTGTACAAGGTA
CAGTGGCAGAAGGAGCGCCGATTATTCCAATTTCTGCTCAGCTGAAGTACAATATCGAAGTTGTCTGTGAGTACATAGTA
AAGAAAATTCCAGTACCTCCCAGAGACTTTACTTCAGAACCCCGACTCATTGTGATTAGGTCCTTTGATGTCAACAAACC
TGGCTGTGAGGTTGATGACCTTAAGGGGGGTGTTGCTGGAGGTAGTATTCTCAAAGGAGTGTTAAAGGTGGGCCAAGAGA
TAGAAGTCCGACCTGGTATTGTTTCCAAAGATAGCGAAGGAAAACTCATGTGTAAGCCAATCTTTTCCAAAATTGTGTCA
CTTTTTGCGGAGCATAATGATCTTCAGTATGCGGCTCCAGGGGGTCTGATTGGAGTTGGAACCAAAATTGACCCCACATT
GTGCCGAGCGGACAGAATGGTGGGACAGGTACTTGGTGCCGTAGGAGCTTTACCTGAGATCTTCACAGAGTTGGAAATTT
CCTATTTCTTACTCAGGCGGCTTCTAGGTGTACGTACTGAAGGAGACAAGAAAGCAGCCAAG
ATGGCGGGGAATGAGGCTGGAGTCACTCTGGGGCAGCTTCATCTTTCTCGGCAGGATCTCACCACCTTGGATGTTACCAA
ATTGACACCACTGTCCCATGAAGTCATCAGCAGACAAGCCACCATCAATATAGGCACAATTGGTCATGTGGCTCATGGGA
AGTCTACAGTTGTAAAAGCTATTTCTGGCGTCCACACTGTCAGGTTCAAAAATGAACTAGAAAGAAATATTACCATCAAA
CTTGGATATGCTAATGCTAAGATTTATAAACTTGATGACCCAAGTCGCCCTCGACCAGAATGTTATCGATCCTGTGGAAG
CAGTACACCAGATGAGTTTCCGACAGACATTCCAGGGACCAAAGGGAACTTCAAATTAGTCAGGCACGTTTCCTTCGTGG
ACTGTCCAGGCCATGATATTCTGATGGCTACCATGCTGAACGGGGCCGCAGTGATGGATGCAGCTCTTCTGCTGATAGCT
GGTAATGAATCGTGTCCCCAGCCACAGACATCTGAACATCTGGCTGCTATAGAAATCATGAAATTGAAACATATTTTGAT
TCTACAAAATAAAATCGATTTGGTGAAAGAAAGTCAGGCTAAAGAACAGTATGAACAAATTCTTGCGTTTGTACAAGGTA
CAGTGGCAGAAGGAGCGCCGATTATTCCAATTTCTGCTCAGCTGAAGTACAATATCGAAGTTGTCTGTGAGTACATAGTA
AAGAAAATTCCAGTACCTCCCAGAGACTTTACTTCAGAACCCCGACTCATTGTGATTAGGTCCTTTGATGTCAACAAACC
TGGCTGTGAGGTTGATGACCTTAAGGGGGGTGTTGCTGGAGGTAGTATTCTCAAAGGAGTGTTAAAGGTGGGCCAAGAGA
TAGAAGTCCGACCTGGTATTGTTTCCAAAGATAGCGAAGGAAAACTCATGTGTAAGCCAATCTTTTCCAAAATTGTGTCA
CTTTTTGCGGAGCATAATGATCTTCAGTATGCGGCTCCAGGGGGTCTGATTGGAGTTGGAACCAAAATTGACCCCACATT
GTGCCGAGCGGACAGAATGGTGGGACAGGTACTTGGTGCCGTAGGAGCTTTACCTGAGATCTTCACAGAGTTGGAAATTT
CCTATTTCTTACTCAGGCGGCTTCTAGGTGTACGTACTGAAGGAGACAAGAAAGCAGCCAAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014337 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000018584 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000017343 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000011052 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006979 | ortholog_one2many | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000007541 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020194 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002533 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000012178 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012474 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_126 | 78.78 | 69.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_1061 | 97.63 | 53.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_etel_1590 | 92.39 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_etel_2017 | 86.44 | 74.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000000341 retrocopies