Parental gene: | MMU.2327, ENSMMUG00000004380 |
| Aliases: | None |
| Description: | trifunctional enzyme subunit alpha, mitochondrial [Source:RefSeq peptide;Acc:NP_001252819] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 13:26131909..26189076(-) |
>ENSMMUG00000004380
ATGGTGGCCTGCCGGGCAATTGGCATCCTCAGCCGCTTCTCTGCCTTCAGGATCCTCCGCTCCCGAGGTTATATATGCCG
CAATTTTACAGGATCTTCTGCTTTGCTGACCAGAACCCATATTAACTATGGAGTCAAAGGGGATGTGGCAGTTGTTCGAA
TTAACTCTCCCAATTCAAAGGTAAATACACTAAGTAAAGAGCTGCATTCAGAATTCACAGAAGTTATGAATGAAATCTGG
GCTAGTGATCAAATCAGAAGTGCCGTCCTTATCTCATCAAAGCCAGGCTGCTTTATTGCAGGTGCTGATATCAACATGTT
ATCCGCTTGCAAGACCCTTCAAGAAGTAACACAGCTCTCACAAGAAGCACAGAGAATATTAGAGAAACTTGAAAAGTCCC
CAAAGCCTGTTGTGGCTGCCATCAATGGATCCTGCCTGGGAGGAGGACTTGAGCTTGCCATTTCATGCCAATACAGAATA
GCAACAAAAGACAGAAAAACAGTATTAGGTGTCCCTGAAGTCTTGCTGGGGGCCTTACCAGGAGCAGGAGGCACACAAAG
GCTGCCCAAAATGGTGGGTGTGCCTGCTGCCTTGGACATGATGCTGACTGGTAGAAACATTCGTGCAGACAGGGCAAAGA
AAATGGGATTGGTTGACCAATTAGTGGAACCCCTGGGACCAGGACTAAAACCTCCAGAGGAACGGACAATGGAATACCTA
GAAGAGGTTGCAATTACTTTTGCCAAAGGACTAGCTGATAAGAAGATTTCTCCAAAGAGAAACAAGGGATTGGTGGAGAA
ATTGACAGCGTATGCCATGACTATTCCATTTGTCAGGCAACAGGTTTACAAAAAAGTGGAAGAAAAAGTGCGAAAGCAGA
CTAAAGGCCTATATCCTGCACCTCTGAAAATAATTGATGTGGTAAAGACTGGAATTGAGCAAGGGAGTGATGCTGGTTAT
CTCTCTGAATCTCAGAAATTTGGAGAGCTTGTAATGACCAAAGAATCAAAGGCCTTGATGGGACTCTACCATGGTCAGGT
CCTGTGCAAGAAGAATAAATTTGGAGCTCCACAGAAGGATGTTAAGCATCTGGCTATTCTTGGTGCAGGGCTGATGGGAG
CAGGCATCGCCCAAGTCTCCGTAGATAAGGGGCTAAAGACTATACTTAAAGATGCCACCCTCACTGGGCTAGACCGAGGA
CAGCAACAAGTGTTCAAAGGATTAAATGACAAAGTGAAGAAGAAAGCTCTAACATCATTTGAAAGGGATTCCATCTTCAG
CAACTTGACTGGGCAGCTTGATTACCAAGGTTTTGAAAAGGCCGACATGGTGATTGAAGCTGTGTTTGAGGACCTTAGTC
TTAAGCACAGAGTGCTAAAGGAAGTAGAAGCGGTGATTCCAGATCACTGTATCTTTGCCAGTAACACATCTGCTCTCCCA
ATCAGTGAAATTGCTGCTGTCAGCAAAAGACCTGAGAAGGTGATCGGCATGCACTACTTCTCTCCTGTGGACAAGATGCA
GCTGCTGGAGATTATCACGACTGAGAAAACTTCCAGAGACACCAGTGCTTCAGCTGTAGCAGTCGGTCTCAAGCAGGGGA
AGGTCATCATTGTGGTTAAGGATGGACCTGGCTTCTATACTACCAGGTGCCTTGCGCCCATGATGTCTGAAGTCATCCGA
ATCCTCCAGGAAGGAGTTGACCCGAAGAAGCTGGATTCCCTGACCACAAGTTTTGGCTTTCCTGTGGGTGCCGCCACACT
GGTGGATGAAGTTGGCGTGGATGTAGCAAAACATGTGGCGGAAGATCTGGGCAAAGTCTTTGGGGAGCGGTTTGGAGGCG
GAAACCCAGAACTGCTGACACAGATGGTGTCCAAGGGCTTCCTAGGTCGCAAGTCTGGGAAGGGCTTTTACATCTATCAG
GAGGGTGTGAAGAGGAAGGATTTGAATTCTGACATGGATAGTATTTTAGCGAGTCTGAAGCTGCCTCCTAAGTCTGAAGT
CTCCTCAGATGAAGACATCCAGTTCCGCCTGGTGACAAGATTTGTGAATGAGGCAGTCATGTGCCTGCAAGAGGGGATCT
TGGCCACACCTGCGGAGGGAGACATCGGAGCCGTCTTTGGGCTTGGCTTCCCGCCTTGTCTTGGAGGGCCTTTCCGCTTT
GTGGATCTGTATGGCGCCCAGACGATAGTGGACCGGCTCAAGAAGTATGAAGCTGCCTATGGAAAACAGTTCACCCCATG
CCAGCTGCTAGCTGACCATGCTAACAGCCCCAACAAGAAGTTCTACCAGTGA
ATGGTGGCCTGCCGGGCAATTGGCATCCTCAGCCGCTTCTCTGCCTTCAGGATCCTCCGCTCCCGAGGTTATATATGCCG
CAATTTTACAGGATCTTCTGCTTTGCTGACCAGAACCCATATTAACTATGGAGTCAAAGGGGATGTGGCAGTTGTTCGAA
TTAACTCTCCCAATTCAAAGGTAAATACACTAAGTAAAGAGCTGCATTCAGAATTCACAGAAGTTATGAATGAAATCTGG
GCTAGTGATCAAATCAGAAGTGCCGTCCTTATCTCATCAAAGCCAGGCTGCTTTATTGCAGGTGCTGATATCAACATGTT
ATCCGCTTGCAAGACCCTTCAAGAAGTAACACAGCTCTCACAAGAAGCACAGAGAATATTAGAGAAACTTGAAAAGTCCC
CAAAGCCTGTTGTGGCTGCCATCAATGGATCCTGCCTGGGAGGAGGACTTGAGCTTGCCATTTCATGCCAATACAGAATA
GCAACAAAAGACAGAAAAACAGTATTAGGTGTCCCTGAAGTCTTGCTGGGGGCCTTACCAGGAGCAGGAGGCACACAAAG
GCTGCCCAAAATGGTGGGTGTGCCTGCTGCCTTGGACATGATGCTGACTGGTAGAAACATTCGTGCAGACAGGGCAAAGA
AAATGGGATTGGTTGACCAATTAGTGGAACCCCTGGGACCAGGACTAAAACCTCCAGAGGAACGGACAATGGAATACCTA
GAAGAGGTTGCAATTACTTTTGCCAAAGGACTAGCTGATAAGAAGATTTCTCCAAAGAGAAACAAGGGATTGGTGGAGAA
ATTGACAGCGTATGCCATGACTATTCCATTTGTCAGGCAACAGGTTTACAAAAAAGTGGAAGAAAAAGTGCGAAAGCAGA
CTAAAGGCCTATATCCTGCACCTCTGAAAATAATTGATGTGGTAAAGACTGGAATTGAGCAAGGGAGTGATGCTGGTTAT
CTCTCTGAATCTCAGAAATTTGGAGAGCTTGTAATGACCAAAGAATCAAAGGCCTTGATGGGACTCTACCATGGTCAGGT
CCTGTGCAAGAAGAATAAATTTGGAGCTCCACAGAAGGATGTTAAGCATCTGGCTATTCTTGGTGCAGGGCTGATGGGAG
CAGGCATCGCCCAAGTCTCCGTAGATAAGGGGCTAAAGACTATACTTAAAGATGCCACCCTCACTGGGCTAGACCGAGGA
CAGCAACAAGTGTTCAAAGGATTAAATGACAAAGTGAAGAAGAAAGCTCTAACATCATTTGAAAGGGATTCCATCTTCAG
CAACTTGACTGGGCAGCTTGATTACCAAGGTTTTGAAAAGGCCGACATGGTGATTGAAGCTGTGTTTGAGGACCTTAGTC
TTAAGCACAGAGTGCTAAAGGAAGTAGAAGCGGTGATTCCAGATCACTGTATCTTTGCCAGTAACACATCTGCTCTCCCA
ATCAGTGAAATTGCTGCTGTCAGCAAAAGACCTGAGAAGGTGATCGGCATGCACTACTTCTCTCCTGTGGACAAGATGCA
GCTGCTGGAGATTATCACGACTGAGAAAACTTCCAGAGACACCAGTGCTTCAGCTGTAGCAGTCGGTCTCAAGCAGGGGA
AGGTCATCATTGTGGTTAAGGATGGACCTGGCTTCTATACTACCAGGTGCCTTGCGCCCATGATGTCTGAAGTCATCCGA
ATCCTCCAGGAAGGAGTTGACCCGAAGAAGCTGGATTCCCTGACCACAAGTTTTGGCTTTCCTGTGGGTGCCGCCACACT
GGTGGATGAAGTTGGCGTGGATGTAGCAAAACATGTGGCGGAAGATCTGGGCAAAGTCTTTGGGGAGCGGTTTGGAGGCG
GAAACCCAGAACTGCTGACACAGATGGTGTCCAAGGGCTTCCTAGGTCGCAAGTCTGGGAAGGGCTTTTACATCTATCAG
GAGGGTGTGAAGAGGAAGGATTTGAATTCTGACATGGATAGTATTTTAGCGAGTCTGAAGCTGCCTCCTAAGTCTGAAGT
CTCCTCAGATGAAGACATCCAGTTCCGCCTGGTGACAAGATTTGTGAATGAGGCAGTCATGTGCCTGCAAGAGGGGATCT
TGGCCACACCTGCGGAGGGAGACATCGGAGCCGTCTTTGGGCTTGGCTTCCCGCCTTGTCTTGGAGGGCCTTTCCGCTTT
GTGGATCTGTATGGCGCCCAGACGATAGTGGACCGGCTCAAGAAGTATGAAGCTGCCTATGGAAAACAGTTCACCCCATG
CCAGCTGCTAGCTGACCATGCTAACAGCCCCAACAAGAAGTTCTACCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 55 .85 RPM |
| SRP007412_brain | 55 .02 RPM |
| SRP007412_cerebellum | 61 .67 RPM |
| SRP007412_heart | 306 .62 RPM |
| SRP007412_kidney | 191 .31 RPM |
| SRP007412_liver | 102 .13 RPM |
| SRP007412_testis | 178 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000006972 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000084754 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004918 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000023254 | within_species_paralog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000008546 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001616 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000012583 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000011732 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000001593 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_787 | 85.68 | 51.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1987 | 84.21 | 91.74 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000004380 retrocopies