Parental gene: | MMU.13905, ENSMMUG00000002050 |
| Aliases: | None |
| Description: | platelet-activating factor acetylhydrolase IB subunit beta [Source:RefSeq peptide;Acc:NP_001244668] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 14:115540494..115566540(+) |
>ENSMMUG00000002050
ATGAGCCAAGGAGACTCAAACCCAGCAGCTATTCCTCATGCAGCAGAAGATATTCAAGGAGATGACCGATGGATGTCTCA
GCACAACAGATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGTTTGTGGGAGACTCCATGGTGCAGTTAATGC
AGCAATATGAGATATGGCGAGAGCTTTTTTCCCCACTTCATGCACTGAATTTTGGAATTGGGGGAGATACGACAAGACAT
GTTTTGTGGAGACTAAAGAATGGAGAACTGGAGAATATTAAGCCTAAGGTCATTGTTGTCTGGGTAGGAACAAACAACCA
CGAAAATACAGCAGAAGAGGTAGCAGGTGGGATCGAGGCCATTGTACAACTTATCAACACAAGGCAGCCACAGGCCAAAA
TCATTGTATTGGGTTTGTTACCTCGAGGTGAGAAACCCAATCCTTTGAGGCAAAAGAACGCCAAGGTGAACCAACTCCTC
AAGGTTTCGCTGCCGAAGCTTGCCAACGTGCAGCTCCTGGATACCGACGGGGGTTTTGTGCACTCGGACGGTGCCATCTC
CTGCCACGACATGTTTGATTTTCTGCATCTGACAGGAGGGGGCTATGCAAAGATCTGCAAACCCCTGCATGAACTGATCA
TGCAGTTGTTGGAGGAAACACCTGAGGAGAAACAAACCACCATTGCCTGA
ATGAGCCAAGGAGACTCAAACCCAGCAGCTATTCCTCATGCAGCAGAAGATATTCAAGGAGATGACCGATGGATGTCTCA
GCACAACAGATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGTTTGTGGGAGACTCCATGGTGCAGTTAATGC
AGCAATATGAGATATGGCGAGAGCTTTTTTCCCCACTTCATGCACTGAATTTTGGAATTGGGGGAGATACGACAAGACAT
GTTTTGTGGAGACTAAAGAATGGAGAACTGGAGAATATTAAGCCTAAGGTCATTGTTGTCTGGGTAGGAACAAACAACCA
CGAAAATACAGCAGAAGAGGTAGCAGGTGGGATCGAGGCCATTGTACAACTTATCAACACAAGGCAGCCACAGGCCAAAA
TCATTGTATTGGGTTTGTTACCTCGAGGTGAGAAACCCAATCCTTTGAGGCAAAAGAACGCCAAGGTGAACCAACTCCTC
AAGGTTTCGCTGCCGAAGCTTGCCAACGTGCAGCTCCTGGATACCGACGGGGGTTTTGTGCACTCGGACGGTGCCATCTC
CTGCCACGACATGTTTGATTTTCTGCATCTGACAGGAGGGGGCTATGCAAAGATCTGCAAACCCCTGCATGAACTGATCA
TGCAGTTGTTGGAGGAAACACCTGAGGAGAAACAAACCACCATTGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 50 .77 RPM |
| SRP007412_brain | 64 .88 RPM |
| SRP007412_cerebellum | 59 .67 RPM |
| SRP007412_heart | 18 .25 RPM |
| SRP007412_kidney | 22 .89 RPM |
| SRP007412_liver | 8 .87 RPM |
| SRP007412_testis | 31 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008628 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000013226 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012698 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000011274 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000029945 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000168092 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028197 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000012172 | within_species_paralog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000004246 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007337 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000003907 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000004318 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018032 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011403 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_892 | 77.78 | 55.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_2481 | 85.22 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000002050 retrocopies