Parental gene:

ENSG00000131469, ENSGGOG00000026039

Aliases:None
Description:60S ribosomal protein L27 [Source:UniProtKB/TrEMBL;Acc:G3S8W1]
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:41030245..41034804(-)


>ENSGGOG00000026039
ATGGGCAAGTTCATGAAACCTGGGAAGGTGGTGCTTGTCCTGGCTGGACGCTACTCCGGACGCAAAGCTGTCATCGTGAA
GAACATTGATGATGGCACCTCAGATCGCCCCTACAGCCATGCTCTGGTGGCTGGAATTGACCGCTACCCCCGCAAAGTGA
CAGCTGCCATGGGCAAGAAGAAGATCGCCAAGAGATCAAAGATAAAATCTTTTGTGAAAGTTTATAACTACAATCACCTA
ATGCCCACAAGGTACTCTGTGGATATCCCCTTGGACAAAACTGTCGTCAATAAGGATGTCTTCAGAGATCCTGCTCTTAA
ACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTTGAAGAGAGATACAAGACAGGCAAGAACAAGTGGTTCTTCCAGAAAC
TGCGGTTTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 138 .16 RPM
SRP007412_cerebellum 131 .47 RPM
SRP007412_heart 125 .77 RPM
SRP007412_kidney 178 .23 RPM
SRP007412_liver 209 .68 RPM
SRP007412_testis 146 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000200 possible_ortholog 3 retrogenes
Bos taurus ENSBTAG00000017441 possible_ortholog 6 retrogenes
Canis familiaris ENSCAFG00000014630 possible_ortholog 6 retrogenes
Callithrix jacchus ENSCJAG00000013067 ortholog_one2many 9 retrogenes
Cavia porcellus ENSCPOG00000027359 possible_ortholog 3 retrogenes
Dipodomys ordii ENSDORG00000010907 possible_ortholog 6 retrogenes
Equus caballus ENSECAG00000007500 possible_ortholog 1 retrogene
Echinops telfairi ENSETEG00000002811 possible_ortholog 23 retrogenes
Felis catus ENSFCAG00000013142 possible_ortholog 6 retrogenes
Homo sapiens ENSG00000131469 ortholog_one2one 6 retrogenes
Loxodonta africana ENSLAFG00000014220 possible_ortholog 3 retrogenes
Microcebus murinus ENSMICG00000014214 ortholog_one2one 5 retrogenes
Myotis lucifugus ENSMLUG00000004119 ortholog_many2many 1 retrogene
Macaca mulatta ENSMMUG00000008090 possible_ortholog 7 retrogenes
Monodelphis domestica ENSMODG00000015128 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000009913 possible_ortholog 11 retrogenes
Mus musculus ENSMUSG00000063316 possible_ortholog 2 retrogenes
Nomascus leucogenys ENSNLEG00000011901 ortholog_one2many 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000003872 ortholog_one2many 1 retrogene
Otolemur garnettii ENSOGAG00000003940 ortholog_one2one 14 retrogenes
Procavia capensis ENSPCAG00000013249 possible_ortholog 4 retrogenes
Pan troglodytes ENSPTRG00000009232 ortholog_one2one 6 retrogenes
Pteropus vampyrus ENSPVAG00000008817 ortholog_one2many 4 retrogenes
Rattus norvegicus ENSRNOG00000020674 possible_ortholog 8 retrogenes
Sorex araneus ENSSARG00000011131 possible_ortholog 10 retrogenes
Sarcophilus harrisii ENSSHAG00000012042 ortholog_many2many 4 retrogenes
Sus scrofa ENSSSCG00000025507 possible_ortholog 5 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020555 possible_ortholog 5 retrogenes
Tarsius syrichta ENSTSYG00000003167 ortholog_one2one 12 retrogenes
Tursiops truncatus ENSTTRG00000011739 possible_ortholog 2 retrogenes
Vicugna pacos ENSVPAG00000002574 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_298 73.38 99.26
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2. retro_ggor_907 68.04 69.85
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3. retro_ggor_1741 77.37 100.00
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4. retro_ggor_1852 76.00 90.44
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5. retro_ggor_2546 88.97 100.00
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6. retro_ggor_2630 88.97 100.00
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Download FASTA sequences of all ENSGGOG00000026039 retrocopies