Parental gene: | MKRN1, ENSGGOG00000023977 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 7:138799008..138825300(-) |
>ENSGGOG00000023977
AGACAGGAACTATATAATCCCGGAAGTTCCGGGGCTTTGCTGTGTGGGATAACCAGCAATGGCGAGGCTGTAGCTCCCTC
CCCAACCCTGGTCCCCACAGTCACCACCCCATCCCCTGGGGCAGGCAGCTGGACTAAACAGGTCACCTGCAGGTATTTTA
TGCATGGGGTTTGTAAGGACAGAGGTAACTGTGGATACTCGCATGACCTCTCTGACAGTCCGTATGGTGTAGTGTGCAAG
TATTTTCAGCAAGGGTACTGTGTTTATGGTGACTGCTGCAAATATGAACATAGCAAGCCATTGAAACAGGAAGAAGCAAC
TGCTACAGAGCTAACTACAAAGTCATCCCTTGCTGCTTCCTCAAGTCTCTCATCGATAGTTGGACCACTTGTTGAAATGA
ATACAGGCGAAGCTGAGTCAAGAAATTCAAACTTTGCAACTGTAGGAGCAGGTTCAGAGGACTGGGTGAATGCTATTGAG
TTTGTTCCTGGGCAACCCTACTGTGGCCGTACTGCGCCTTCCTGCACTGAAGCACCCCTGCAGGGCTCAGTGACCAAGGA
AGAATCAGAGAAAGAGCAAACCGCCGTGGAGACAAAGAAGCAGCTGTGCCCCTATGCTGCAGTGGGAGAGTGCCGATACG
GGGAGAACTGTGTGTATCTCCACGGAGATTCTTGTGACATGTGTGGGCTGCAGGTCCTGCATCCAATGGATGCTGCCCAG
AGATCGCAGCATATCAAATCGTGCATTGAGGCCCATGAGAAGGACATGGAGCTCTCATTTGCCGTGCAGCGCAGCAAGGA
CATGGTGTGTGGGATCTGCATGGAGGTGGTCTATGAGAAAGCCAACCCCAGTGAGCGCCGCTTCGGGATCCTCTCCAACT
GCAACCACACCTACTGTCTCAAGTGCATTCGCAAGTGGAGGAGTGCTAAGCAATTTGAGAGCAAGATCATAAAGTCCTGC
CCAGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGTACTGGGTGGAGGAGAAAGAAGAGAAGCAGAAACTCAT
TCTGAAATACAAGGAGGCAATGAGCAACAAGGCGTGCAGGTATTTTGATGAAGGACGTGGGAGCTGCCCATTTGGAGGGA
ACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGAGCCACAGAGACAGAAAGTGGGAACATCAAGCAGATAC
CGGGCCCAACGAAGGAACCACTTCTGGGAACTCATTGAGGAAAGAGAGAACAGCAACCCCTTTGACAACGACGAAGAAGA
GGTTGTCACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCTACAGGTGGGGACGACGAACTAACAGACTCTGAAG
ATGAGTGGGACTTGTTTCATGATGAGCTGGAAGATTTTTATGACTTGGATCTATAG
AGACAGGAACTATATAATCCCGGAAGTTCCGGGGCTTTGCTGTGTGGGATAACCAGCAATGGCGAGGCTGTAGCTCCCTC
CCCAACCCTGGTCCCCACAGTCACCACCCCATCCCCTGGGGCAGGCAGCTGGACTAAACAGGTCACCTGCAGGTATTTTA
TGCATGGGGTTTGTAAGGACAGAGGTAACTGTGGATACTCGCATGACCTCTCTGACAGTCCGTATGGTGTAGTGTGCAAG
TATTTTCAGCAAGGGTACTGTGTTTATGGTGACTGCTGCAAATATGAACATAGCAAGCCATTGAAACAGGAAGAAGCAAC
TGCTACAGAGCTAACTACAAAGTCATCCCTTGCTGCTTCCTCAAGTCTCTCATCGATAGTTGGACCACTTGTTGAAATGA
ATACAGGCGAAGCTGAGTCAAGAAATTCAAACTTTGCAACTGTAGGAGCAGGTTCAGAGGACTGGGTGAATGCTATTGAG
TTTGTTCCTGGGCAACCCTACTGTGGCCGTACTGCGCCTTCCTGCACTGAAGCACCCCTGCAGGGCTCAGTGACCAAGGA
AGAATCAGAGAAAGAGCAAACCGCCGTGGAGACAAAGAAGCAGCTGTGCCCCTATGCTGCAGTGGGAGAGTGCCGATACG
GGGAGAACTGTGTGTATCTCCACGGAGATTCTTGTGACATGTGTGGGCTGCAGGTCCTGCATCCAATGGATGCTGCCCAG
AGATCGCAGCATATCAAATCGTGCATTGAGGCCCATGAGAAGGACATGGAGCTCTCATTTGCCGTGCAGCGCAGCAAGGA
CATGGTGTGTGGGATCTGCATGGAGGTGGTCTATGAGAAAGCCAACCCCAGTGAGCGCCGCTTCGGGATCCTCTCCAACT
GCAACCACACCTACTGTCTCAAGTGCATTCGCAAGTGGAGGAGTGCTAAGCAATTTGAGAGCAAGATCATAAAGTCCTGC
CCAGAATGCCGGATCACATCTAACTTTGTCATTCCAAGTGAGTACTGGGTGGAGGAGAAAGAAGAGAAGCAGAAACTCAT
TCTGAAATACAAGGAGGCAATGAGCAACAAGGCGTGCAGGTATTTTGATGAAGGACGTGGGAGCTGCCCATTTGGAGGGA
ACTGTTTTTACAAGCATGCGTACCCTGATGGCCGTAGAGAGGAGCCACAGAGACAGAAAGTGGGAACATCAAGCAGATAC
CGGGCCCAACGAAGGAACCACTTCTGGGAACTCATTGAGGAAAGAGAGAACAGCAACCCCTTTGACAACGACGAAGAAGA
GGTTGTCACCTTTGAGCTGGGCGAGATGTTGCTTATGCTTTTGGCTACAGGTGGGGACGACGAACTAACAGACTCTGAAG
ATGAGTGGGACTTGTTTCATGATGAGCTGGAAGATTTTTATGACTTGGATCTATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 72 .46 RPM |
| SRP007412_cerebellum | 59 .22 RPM |
| SRP007412_heart | 26 .64 RPM |
| SRP007412_kidney | 52 .54 RPM |
| SRP007412_liver | 35 .19 RPM |
| SRP007412_testis | 400 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000008306 | ortholog_many2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000003953 | ortholog_many2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000011015 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013474 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000000948 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000019564 | ortholog_one2many | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000001133 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000024942 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000133606 | ortholog_one2one | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000007399 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000002114 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010420 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000029922 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001921 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009877 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000010353 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000014683 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018057 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000019766 | ortholog_one2one | 5 retrogenes | |
| Sus scrofa | ENSSSCG00000016498 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000004564 | possible_ortholog | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009996 | ortholog_one2many | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000009528 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_119 | 63.14 | 64.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_381 | 82.83 | 50.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2813 | 85.67 | 65.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_3031 | 83.90 | 86.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000023977 retrocopies