Parental gene:

ATG3, ENSGGOG00000006637

Aliases:None
Description:Autophagy-related protein 3 [Source:UniProtKB/TrEMBL;Acc:G3QUT6]
Organism:Gorilla (Gorilla gorilla)
Coordinates:3:111805483..111835370(-)


>ENSGGOG00000006637
ATGCAGAATGTGATTAATACTGTGAAGGGAAAGGCACTGGAAGTGGCTGAGTACCTGACCCCGGTCCTCAAGGAATCAAA
GTTTAAGGAAACAGGTGTAATTACCCCAGAAGAGTTTGTGGCAGCTGGAGATCACCTAGTCCACCACTGTCCAACATGGC
AATGGGCTACAGGGGAAGAATTGAAAGTGAAGGCATACCTACCAACAGGCAAACAATTTTTGGTAACCAAAAATGTGCCG
TGCTATAAGCGGTGCAAACAGATGGAATATTCAGATGAATTGGAAGCTATCATTGAAGAAGATGATGGTGATGGCGGATG
GGTAGATACATATCACAACACAGGTATTACAGGAATAACGGAAGCAGTTAAAGAGATCACACTGGAAAATAAGGACAATA
TACGGCTTCAAGATTGCTCAGCACTATGTGAAGAGGAAGAAGATGAAGATGAAGGAGAAGCTGCAGATATGGAAGAATAT
GAAGAGAGTGGATTGTTGGAAACAGATGAGGCTACCCTAGATACAAGGAAAATAGTAGAAGCTTGTAAAGCCAAAACTGA
TGCTGGCGGTGAAGATGCTATTTTGCAAACCAGAACTTATGACCTTTACATCACTTATGATAAATATTACCAGACTCCAC
GATTATGGTTGTTTGGCTATGATGAGCAACGGCAGCCTTTAACAGTTGAGCACATGTATGAAGACATCAGTCAGGATCAT
GTGAAGAAAACAGTGACCATTGAAAATCACCCTCATCTGCCACCACCTCCCATGTGTTCAGTTCACCCATGCAGGCATGC
TGAAGTGATGAAGAAAATCATTGAGACTGTTGCAGAAGGAGGGGGAGAACTTGGAGTTCATATGTATCTTCTTATTTTCT
TGAAATTTGTACAAGCTGTCATTCCAACAATAGAATATGACTACACAAGACACTTCACAATGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 28 .68 RPM
SRP007412_cerebellum 21 .87 RPM
SRP007412_heart 6 .69 RPM
SRP007412_kidney 38 .64 RPM
SRP007412_liver 18 .41 RPM
SRP007412_testis 114 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018116 ortholog_one2many 1 retrogene
retro_amel_645,
Callithrix jacchus ENSCJAG00000020358 ortholog_one2one 1 retrogene
retro_cjac_2756,
Equus caballus ENSECAG00000011954 ortholog_one2one 1 retrogene
retro_ecab_594,
Homo sapiens ENSG00000144848 ortholog_one2one 1 retrogene
retro_hsap_2479,
Myotis lucifugus ENSMLUG00000001573 ortholog_one2one 1 retrogene
retro_mluc_1025,
Macaca mulatta ENSMMUG00000014232 ortholog_one2one 1 retrogene
retro_mmul_594,
Mustela putorius furo ENSMPUG00000000321 ortholog_one2many 2 retrogenes
retro_mputfur_1064, retro_mputfur_1614,
Nomascus leucogenys ENSNLEG00000004302 ortholog_one2one 2 retrogenes
retro_nleu_268, retro_nleu_331,
Oryctolagus cuniculus ENSOCUG00000015651 ortholog_one2many 1 retrogene
retro_ocun_1219,
Pongo abelii ENSPPYG00000013548 ortholog_one2one 1 retrogene
retro_pabe_1827,
Pan troglodytes ENSPTRG00000015220 ortholog_one2one 1 retrogene
retro_ptro_1434,
Pteropus vampyrus ENSPVAG00000009568 ortholog_one2one 1 retrogene
retro_pvam_1399,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1544 68.87 81.21
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Download FASTA sequences of all ENSGGOG00000006637 retrocopies