Parental gene: | TDGF1, ENSGGOG00000003453 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 3:47815792..47819048(+) |
>ENSGGOG00000003453
ATGGACTGCAGGAAGATGGCCCGCTTCTCTTACAGTGTGATTTGGATCATGGCCATTTCTAAAGCCTTTGAACTGGGATT
AGTTGCCGGCCTGGGCCATCAGGAATTTGCTCGTCCATCTCGGGGAGACCTGGCCTTCAGAGACGACAGCATTTGGCCCC
AGGAGGAGCCTGCAATTCGGCCTCGGTCCTCCCAGCGTGTGCCGCCCATGGGGATACAGCACAGCAAGGAGCTAAACAGA
ACCTGCTGCCTGAATGGGGGAACCTGCATGCTGGGGTCCTTTTGTGCCTGCCCTCCCTCCTTCTACGGACGGAACTGTGA
GCACGATGTGCGCAAAGAGAACTGTGGGTCTGTGCCCCATGACACCTGGCTGCCCAAGAAGTGTTCCCTGTGTAAATGCT
GGCACGGTCAGCTCCGCTGCTTTCCTCAGGCATTTCTACCCGGCTGTGATGGCCTTGTGATGGATGAGCACCTCGTGGCT
TCCAGGACTCCAGAACTACCACCGTCTGCACGTACTACCACTTTTATGCTAGTTGGCATCTGCCTTTCTATACAAAGCTA
CTATTAA
ATGGACTGCAGGAAGATGGCCCGCTTCTCTTACAGTGTGATTTGGATCATGGCCATTTCTAAAGCCTTTGAACTGGGATT
AGTTGCCGGCCTGGGCCATCAGGAATTTGCTCGTCCATCTCGGGGAGACCTGGCCTTCAGAGACGACAGCATTTGGCCCC
AGGAGGAGCCTGCAATTCGGCCTCGGTCCTCCCAGCGTGTGCCGCCCATGGGGATACAGCACAGCAAGGAGCTAAACAGA
ACCTGCTGCCTGAATGGGGGAACCTGCATGCTGGGGTCCTTTTGTGCCTGCCCTCCCTCCTTCTACGGACGGAACTGTGA
GCACGATGTGCGCAAAGAGAACTGTGGGTCTGTGCCCCATGACACCTGGCTGCCCAAGAAGTGTTCCCTGTGTAAATGCT
GGCACGGTCAGCTCCGCTGCTTTCCTCAGGCATTTCTACCCGGCTGTGATGGCCTTGTGATGGATGAGCACCTCGTGGCT
TCCAGGACTCCAGAACTACCACCGTCTGCACGTACTACCACTTTTATGCTAGTTGGCATCTGCCTTTCTATACAAAGCTA
CTATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .00 RPM |
| SRP007412_cerebellum | 0 .12 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .82 RPM |
| SRP007412_liver | 0 .42 RPM |
| SRP007412_testis | 0 .31 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002174 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000014508 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000241186 | ortholog_one2one | 7 retrogenes | |
| Loxodonta africana | ENSLAFG00000009140 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000016492 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003088 | ortholog_one2one | 6 retrogenes | |
| Mustela putorius furo | ENSMPUG00000015167 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000032494 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006143 | ortholog_one2one | 6 retrogenes | |
| Otolemur garnettii | ENSOGAG00000017039 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014854 | ortholog_one2one | 7 retrogenes | |
| Tarsius syrichta | ENSTSYG00000013609 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000017299 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1447 | 83.11 | 77.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1815 | 86.79 | 84.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2307 | 70.67 | 78.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2943 | 97.88 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_2990 | 71.43 | 66.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000003453 retrocopies