Parental gene:

ENSG00000177350, ENSGGOG00000002932

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:19:46823830..46828509(+)


>ENSGGOG00000002932
ATGGCGGAGGTGCAGGTCCTGGTGCTTGATGGTCGAGGCCATCTCCTGGGCCGCCTGGCGGCCATCGTGGCTAAACAGGT
ACTGCTGGGCCGCAAGGTGGTGGTCGTACGCTGTGAAGGCATCAACATTTCTGGCAATTTCTACAGAAACAAGTTGAAGT
ACCTGGCTTTCCTCCGCAAGCGGATGAACACCAACCCTTCCCGAGGCCCCTACCACTTCCGGGCCCCCAGCCGCATCTTC
TGGCGGACCGTGCGAGGTATGCTGCCCCACAAGACCAAGCGAGGCCAGGCCGCTCTGGACCGTCTCAAGGTGTTTGACGG
CATCCCACCACCCTACGACAAGAAAAAGCGGATGGTGGTTCCTGCTGCCCTCAAGGTCGTGCGTCTGAAGCCTACAAGAA
AGTTTGCCTATCTGGGGCGCCTGGCTCACGAGGTTGGCTGGAAGTACCAGGCAGTGACAGCCACCCTGGAGGAGAAGAGG
AAAGAGAAAGCCAAGATCCACTACCGGAAGAAGAAACAGCTCATGAGGCTACGGAAACAGGCCGAGAAGAACGTGGAGAA
GAAAATTGACAAATACACAGAGGTCCTCAAGACCCACGGACTCCTGGTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 202 .37 RPM
SRP007412_cerebellum 267 .43 RPM
SRP007412_heart 188 .53 RPM
SRP007412_kidney 447 .28 RPM
SRP007412_liver 505 .64 RPM
SRP007412_testis 207 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005296 possible_ortholog 3 retrogenes
retro_btau_1251, retro_btau_719, retro_btau_789,
Callithrix jacchus ENSCJAG00000000072 possible_ortholog 16 retrogenes
retro_cjac_1130, retro_cjac_1706, retro_cjac_182, retro_cjac_197, retro_cjac_1997, retro_cjac_2170, retro_cjac_2322, retro_cjac_2467, retro_cjac_2468, retro_cjac_2665, retro_cjac_2699, retro_cjac_2755, retro_cjac_3009, retro_cjac_664, retro_cjac_941, retro_cjac_972,
Cavia porcellus ENSCPOG00000012417 possible_ortholog 2 retrogenes
retro_cpor_1000, retro_cpor_888,
Equus caballus ENSECAG00000015832 possible_ortholog 3 retrogenes
retro_ecab_388, retro_ecab_653, retro_ecab_773,
Erinaceus europaeus ENSEEUG00000014071 possible_ortholog 6 retrogenes
retro_eeur_168, retro_eeur_310, retro_eeur_315, retro_eeur_484, retro_eeur_562, retro_eeur_618,
Echinops telfairi ENSETEG00000017076 possible_ortholog 2 retrogenes
retro_etel_46, retro_etel_853,
Felis catus ENSFCAG00000009194 possible_ortholog 4 retrogenes
retro_fcat_1197, retro_fcat_1649, retro_fcat_324, retro_fcat_548,
Loxodonta africana ENSLAFG00000016213 ortholog_one2many 3 retrogenes
retro_lafr_1160, retro_lafr_576, retro_lafr_810,
Myotis lucifugus ENSMLUG00000004945 possible_ortholog 10 retrogenes
retro_mluc_1015, retro_mluc_1342, retro_mluc_1836, retro_mluc_1894, retro_mluc_2219, retro_mluc_2221, retro_mluc_2427, retro_mluc_2471, retro_mluc_2506, retro_mluc_675,
Mustela putorius furo ENSMPUG00000002604 possible_ortholog 3 retrogenes
retro_mputfur_1418, retro_mputfur_853, retro_mputfur_935,
Mus musculus ENSMUSG00000074129 possible_ortholog 3 retrogenes
retro_mmus_1129, retro_mmus_1334, retro_mmus_20,
Otolemur garnettii ENSOGAG00000004625 possible_ortholog 7 retrogenes
retro_ogar_1496, retro_ogar_211, retro_ogar_2254, retro_ogar_3148, retro_ogar_54, retro_ogar_596, retro_ogar_612,
Ochotona princeps ENSOPRG00000001194 possible_ortholog 3 retrogenes
retro_opri_316, retro_opri_764, retro_opri_806,
Procavia capensis ENSPCAG00000004086 possible_ortholog 4 retrogenes
retro_pcap_163, retro_pcap_290, retro_pcap_415, retro_pcap_416,
Pongo abelii ENSPPYG00000010251 ortholog_one2one 1 retrogene
retro_pabe_148,
Pteropus vampyrus ENSPVAG00000010958 ortholog_one2many 3 retrogenes
retro_pvam_129, retro_pvam_625, retro_pvam_771,
Rattus norvegicus ENSRNOG00000020618 possible_ortholog 10 retrogenes
retro_rnor_1073, retro_rnor_1112, retro_rnor_1212, retro_rnor_1292, retro_rnor_1357, retro_rnor_1742, retro_rnor_564, retro_rnor_593, retro_rnor_665, retro_rnor_988,
Sus scrofa ENSSSCG00000003166 possible_ortholog 4 retrogenes
retro_sscr_290, retro_sscr_300, retro_sscr_392, retro_sscr_743,
Tarsius syrichta ENSTSYG00000008791 possible_ortholog 4 retrogenes
retro_tsyr_1363, retro_tsyr_437, retro_tsyr_620, retro_tsyr_920,
Tursiops truncatus ENSTTRG00000005485 possible_ortholog 7 retrogenes
retro_ttru_1304, retro_ttru_1736, retro_ttru_629, retro_ttru_735, retro_ttru_833, retro_ttru_971, retro_ttru_995,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_6 95.07 100.00
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2. retro_ggor_12 93.60 100.00
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3. retro_ggor_214 97.54 100.00
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4. retro_ggor_334 88.24 100.00
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5. retro_ggor_615 92.65 100.00
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6. retro_ggor_627 87.50 67.00
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7. retro_ggor_846 91.94 61.08
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8. retro_ggor_869 53.64 68.97
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9. retro_ggor_1739 70.11 84.73
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10. retro_ggor_2271 83.74 99.51
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11. retro_ggor_2737 92.50 59.11
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Download FASTA sequences of all ENSGGOG00000002932 retrocopies