Parental gene: | CCDC58, ENSGGOG00000001964 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 3:121988860..122012315(-) |
>ENSGGOG00000001964
ATGGCGGCGCCCAGTGGCGGTGTGAACTGTGAGGAGTTCGCCGAGTTCCAGGAATTACTCAAGGTGATGAGGACAATTGA
TGACAGAATAGTACATGAATTAAACACTACGGTTCCAACAGCTTCCTTTGCAGGGAAAATTGATGCCAGCCAAACCTGTA
AACAACTTTATGAGTCTTTGATGGCAGCTCATGCCAGTAGAGACAGAGTCATAAAAAATTGTATAGCCCAGACTTCAGCA
GTAGTAAAAAACCTCCGAGAAGAGAGAGAAAAGAATTTGGACGATTTAACGTTATTAAAGCAACTTAGAAAAGAGCAGAC
AAAGTTGAAATGGATGCAGTCAGAACTGAATGTTGAAGAAGTGGTAAATGACAGGAGCTGGAAGGTGTTTAATGAACGCT
GCCGAATTCACTTCAAGCCTCCAAAGAATGAATAA
ATGGCGGCGCCCAGTGGCGGTGTGAACTGTGAGGAGTTCGCCGAGTTCCAGGAATTACTCAAGGTGATGAGGACAATTGA
TGACAGAATAGTACATGAATTAAACACTACGGTTCCAACAGCTTCCTTTGCAGGGAAAATTGATGCCAGCCAAACCTGTA
AACAACTTTATGAGTCTTTGATGGCAGCTCATGCCAGTAGAGACAGAGTCATAAAAAATTGTATAGCCCAGACTTCAGCA
GTAGTAAAAAACCTCCGAGAAGAGAGAGAAAAGAATTTGGACGATTTAACGTTATTAAAGCAACTTAGAAAAGAGCAGAC
AAAGTTGAAATGGATGCAGTCAGAACTGAATGTTGAAGAAGTGGTAAATGACAGGAGCTGGAAGGTGTTTAATGAACGCT
GCCGAATTCACTTCAAGCCTCCAAAGAATGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .82 RPM |
| SRP007412_cerebellum | 0 .98 RPM |
| SRP007412_heart | 0 .66 RPM |
| SRP007412_kidney | 2 .37 RPM |
| SRP007412_liver | 2 .72 RPM |
| SRP007412_testis | 1 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011138 | ortholog_one2many | 4 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000004505 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000008132 | ortholog_many2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000005535 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000023743 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000003564 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000160124 | ortholog_one2many | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000016049 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000937 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000011919 | ortholog_one2many | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000018298 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000004777 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000075229 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000291 | ortholog_one2many | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002682 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003190 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000013486 | ortholog_one2many | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000012707 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000031653 | ortholog_one2many | 2 retrogenes | |
| Sorex araneus | ENSSARG00000004054 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025107 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000004419 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003196 | ortholog_one2many | 6 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013399 | ortholog_one2many | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000002150 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_132 | 92.91 | 97.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_582 | 84.46 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_722 | 82.89 | 52.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_1369 | 98.17 | 75.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_1370 | 95.33 | 73.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ggor_1939 | 77.59 | 79.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ggor_2951 | 60.23 | 60.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ggor_2952 | 60.23 | 60.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ggor_2953 | 60.23 | 60.42 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000001964 retrocopies