Parental gene:

gtf3ab, ENSGACG00000003107

Aliases:None
Description:general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
Organism:Stickleback (Gasterosteus aculeatus)
Coordinates:groupXXI:7582348..7584676(-)


>ENSGACG00000003107
ATGGGGGAGAGGTTGCAAAGTCCCAAAATGTACATTTGCTCTTTTTCTGATTGTAAAGCTGCATTTAGTAAGTCCTGGAA
GTTGGAAGCACATCTTTGCAAACACACAGGATTGAAGCCGTTCTCCTGCGAGAACTGCGACCAGAGCTTTTGCACTCGCT
ATCAACTCACCAAACATGAGCTCCATCACAGTGGGGAGAAAACGCACAAGTGTCCGGCTGACGGATGCTCCAGGGTCTTT
GTCACAAAGGGCAGCATGAAGAACCACGTGGCTCGAGCTCACCAGCAACAGGAGAAACAATATCCGTGTGACCATCAGGG
CTGTGGAAAAGGTTTCAACAAGCGGAACCAACTCAAAGCCCACAAGTGTGAGCACTTGCAGATTCTTCCATTTCCTTGTA
CCATCAGCGGCTGCACAAAGGCACTTCCCACCCATGGAAAACTAAAGCGTCATGAGAAAGTACATAGAGGTTACCAGTGT
GAGCAGGAAGCCTGTCCTTTCCAGGGAAATACTTGGACAGAATATCTGCAGCACAGGAAAGAACACAAAGTCAAGGTGCA
GTGTGGCGAGTGTAAGAAGCTGTTTAACAACGCATGGTTCCTGCACCAGCATGGGCTGCGTGTCCACGCTGGGGAGAAGC
CGCAGCAGCAGCTGCTGTGCCCAAAGGAGGGTTGTGGGAAAAGGTTCACGCGTCCCTTCAACTTGGAGAGTCACGTACTG
GGAGACCATGAGGGCAAGAAGCCCTTTAGCTGTGTGTATGCCGGCTGCGGCAAGAGCTTCGCCATGAAGGAGAGCCTGTG
GCGACATGGAGTGGTGCATGACGTGACAAAGAAAAAACTCAAGAAAGTTCCTAAAAAGAAGACCTGGGTTAAGGCCGTGC
AGGTCAGACAGGCCAACCAAGCAGAGGCCAACAAGCTTGCTGAGAAGCTGCACAATGCAACTTTAAAGGATGACCGAGGA
TCACGTTCTCCTTAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019373 ortholog_one2many 1 retrogene
retro_cjac_3066,
Equus caballus ENSECAG00000014803 ortholog_one2many 1 retrogene
retro_ecab_866,
Felis catus ENSFCAG00000006982 ortholog_one2many 1 retrogene
retro_fcat_426,
Gorilla gorilla ENSGGOG00000008407 ortholog_one2many 1 retrogene
retro_ggor_2622,
Microcebus murinus ENSMICG00000014763 ortholog_one2many 1 retrogene
retro_mmur_368,
Macaca mulatta ENSMMUG00000009029 ortholog_one2many 1 retrogene
retro_mmul_1632,
Nomascus leucogenys ENSNLEG00000000331 ortholog_one2many 2 retrogenes
retro_nleu_1134, retro_nleu_214,
Oreochromis niloticus ENSONIG00000014134 ortholog_one2one 1 retrogene
retro_onil_8,
Vicugna pacos ENSVPAG00000004995 ortholog_one2many 1 retrogene
retro_vpac_456,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_gacu_6 50.52 88.89
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Download FASTA sequences of all ENSGACG00000003107 retrocopies