Parental gene:

TSEN15, ENSG00000198860

Aliases:TSEN15, C1orf19, sen15
Description:tRNA splicing endonuclease 15 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16791]
Organism:Human (Homo sapiens)
Coordinates:1:184020810..184043346(+)


>ENSG00000198860
ATGGAGGAGCGCGGCGATTCCGAGCCGACCCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCTTTGGCGACGG
CGGTGGAGCTCCTTCGTGGGCCCCTGAGGACGCCTGGATGGGCACTCACCCTAAGTATCTAGAAATGATGGAATTAGATA
TAGGAGATGCCACCCAAGTTTATGTAGCGTTCTTGGTTTACCTGGACCTCATGGAAAGCAAAAGCTGGCATGAAGTAAAC
TGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTGGTACTGAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCC
TACCCCCATCACTGCTTCCCTCAGCCATAACAGGATAAGGGAGATCTTGAAGGCATCTCGAAAGTTGCAAGGTGATCCAG
ATTTGCCGATGTCTTTTACTTTGGCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACTTACTGATGGATTTATG
CTGCCAGACCCTCAGAATATTTCTCTTAGAAGATGA

Library Parental gene expression (RPM)
bodymap2_liver 13 .52 RPM
bodymap2_lung 16 .10 RPM
bodymap2_breast 24 .24 RPM
bodymap2_adipose 14 .61 RPM
bodymap2_adrenal 27 .80 RPM
bodymap2_skeletal_muscle 16 .01 RPM
bodymap2_thyroid 25 .99 RPM
bodymap2_prostate 25 .03 RPM
bodymap2_colon 23 .55 RPM
bodymap2_testis 32 .73 RPM
bodymap2_brain 28 .41 RPM
bodymap2_heart 17 .69 RPM
bodymap2_white_blood_cells 34 .28 RPM
bodymap2_lymph_node 21 .73 RPM
bodymap2_ovary 42 .87 RPM
bodymap2_kidney 22 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016369 ortholog_one2one 1 retrogene
retro_btau_971,
Callithrix jacchus ENSCJAG00000005356 ortholog_one2one 1 retrogene
retro_cjac_3055,
Dasypus novemcinctus ENSDNOG00000017611 ortholog_one2one 2 retrogenes
retro_dnov_1176, retro_dnov_2529,
Gorilla gorilla ENSGGOG00000015804 ortholog_one2one 2 retrogenes
retro_ggor_2267, retro_ggor_240,
Loxodonta africana ENSLAFG00000014109 ortholog_one2one 1 retrogene
retro_lafr_684,
Macaca mulatta ENSMMUG00000016409 ortholog_one2one 1 retrogene
retro_mmul_1214,
Mustela putorius furo ENSMPUG00000011790 ortholog_one2one 1 retrogene
retro_mputfur_1261,
Mus musculus ENSMUSG00000014980 ortholog_one2one 1 retrogene
retro_mmus_2721,
Nomascus leucogenys ENSNLEG00000018024 ortholog_one2many 1 retrogene
retro_nleu_98,
Otolemur garnettii ENSOGAG00000003128 ortholog_one2one 1 retrogene
retro_ogar_3264,
Pongo abelii ENSPPYG00000000421 ortholog_one2one 4 retrogenes
retro_pabe_1436, retro_pabe_3065, retro_pabe_3196, retro_pabe_469,
Pan troglodytes ENSPTRG00000023202 ortholog_one2one 2 retrogenes
retro_ptro_1229, retro_ptro_147,
Pteropus vampyrus ENSPVAG00000001103 ortholog_one2one 1 retrogene
retro_pvam_1458,
Ictidomys tridecemlineatus ENSSTOG00000013230 ortholog_one2one 2 retrogenes
retro_itri_1538, retro_itri_1849,
Vicugna pacos ENSVPAG00000002941 ortholog_one2one 2 retrogenes
retro_vpac_381, retro_vpac_565,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1721 88.62 71.35
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Download FASTA sequences of all ENSG00000198860 retrocopies